Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G003000.1 | Wheat | plastid | 95.16 | 97.13 |
| TraesCS7A01G003100.1 | Wheat | plastid | 94.71 | 96.89 |
| TraesCS4A01G495500.1 | Wheat | plastid | 94.59 | 95.89 |
| Os02t0719800-02 | Rice | plasma membrane | 79.17 | 82.9 |
| EER89028 | Sorghum | nucleus | 76.46 | 80.36 |
| Zm00001d045611_P001 | Maize | nucleus | 75.23 | 78.87 |
| Zm00001d035869_P017 | Maize | golgi | 74.55 | 77.61 |
| GSMUA_Achr10P... | Banana | nucleus | 54.84 | 57.77 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 57.09 | 57.35 |
| KRH37781 | Soybean | nucleus | 53.72 | 55.34 |
| KRH12823 | Soybean | nucleus | 53.6 | 55.22 |
| PGSC0003DMT400007982 | Potato | nucleus | 51.35 | 53.58 |
| Solyc02g071270.1.1 | Tomato | extracellular | 48.87 | 51.24 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 34.23 | 49.19 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 49.66 | 49.0 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 56.64 | 36.58 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 53.27 | 35.62 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 48.99 | 35.42 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 23.09 | 34.57 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 36.37 | 34.36 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 5.18 | 26.9 |
| HORVU3Hr1G091930.1 | Barley | nucleus | 14.75 | 19.35 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 6.08 | 15.7 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A287VB93 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | EnsemblPlantsGene:HORVU7Hr1G000370 | EnsemblPlants:HORVU7Hr1G000370.12 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:MEI2-like_RRM3 |
| InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 |
| PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000B483739 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:624431..629244
Molecular Weight (calculated)
97194.4 Da
IEP (calculated)
6.803
GRAVY (calculated)
-0.634
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: GRHNCLHAKF SSFTCLQVPN AVMDRSPAPL SPPGFAVPLA VKKRQQAAPG YSSSSPWGVP PPAPPPATNA PNGLRGGDDT SIFSTSLPVL PHEKLNFPDS
101: AHGTPSMDDA SAKLKDFDDD PQGNDYPFDF DLRQIDDLLP DEDELFAGIT NEIEPSSQAN PVEELEEFDV FGSGGGMELD SDPLDSITAG LGNASIGDGL
201: RANGVSNNFG LSNSPGAVAG EHPLGEHPSR TLFVRNINSN VEDSELRSLF EQFGDIRTLY TATKHRGFVM ISYFDIRAAR GAMRSLQNKP LRRRKLDIHF
301: SIPKENPSDK DLNQGTLVIF NLDPSVSNEE VRQIFGTYGE VKEIRETPNK KHHKFIEFYD VRAAEAALRS LNKSEIAGKR IKLEPSRPGG TRRSLVQHLG
401: HELEQDEPRG YRHSHVGSPM ANSPPGAWAQ YGSPTDNNLL HAFSNSPTGN GMSPIGMSPS MLSNALKIAP IGKDNSWSKY DQVFSNSNQS VGAAFQHSQS
501: YQERKSEHMS SSPGTLTGPE FLWGSPKPYP EHSQSSSMWR PPPVGHAMSS SSRPQGQGFL YGSRQASLFG SLDQNRHHVG SAPSGAPFES HFGFLPESPE
601: TSFMNQVRFA NMGNIGGANR NGGSLMLNMA SRASLNPVSA LSGSLTDNNS TNFRPIPSPR LGQPPFFGNT TYQGPGYYGL DSSIERGRNR RVDSSAFQAD
701: SKKQYQLDLE KIRKGEDTRT TLMIKNIPNK YTSKMLLAAI DELHKGTYDF FYLPIDFKNK CNVGYAFINM ISPVHIVSFY QAFNGKKWEK FNSEKVASLA
801: YGRIQGRNAL ISHFQNSSLM NEDKRCRPIL FHSNGPETGN QEPFPNGICI HMPLDGGAGS SKEPLGFEED DNPNEIKTSG EKSMAGSL
101: AHGTPSMDDA SAKLKDFDDD PQGNDYPFDF DLRQIDDLLP DEDELFAGIT NEIEPSSQAN PVEELEEFDV FGSGGGMELD SDPLDSITAG LGNASIGDGL
201: RANGVSNNFG LSNSPGAVAG EHPLGEHPSR TLFVRNINSN VEDSELRSLF EQFGDIRTLY TATKHRGFVM ISYFDIRAAR GAMRSLQNKP LRRRKLDIHF
301: SIPKENPSDK DLNQGTLVIF NLDPSVSNEE VRQIFGTYGE VKEIRETPNK KHHKFIEFYD VRAAEAALRS LNKSEIAGKR IKLEPSRPGG TRRSLVQHLG
401: HELEQDEPRG YRHSHVGSPM ANSPPGAWAQ YGSPTDNNLL HAFSNSPTGN GMSPIGMSPS MLSNALKIAP IGKDNSWSKY DQVFSNSNQS VGAAFQHSQS
501: YQERKSEHMS SSPGTLTGPE FLWGSPKPYP EHSQSSSMWR PPPVGHAMSS SSRPQGQGFL YGSRQASLFG SLDQNRHHVG SAPSGAPFES HFGFLPESPE
601: TSFMNQVRFA NMGNIGGANR NGGSLMLNMA SRASLNPVSA LSGSLTDNNS TNFRPIPSPR LGQPPFFGNT TYQGPGYYGL DSSIERGRNR RVDSSAFQAD
701: SKKQYQLDLE KIRKGEDTRT TLMIKNIPNK YTSKMLLAAI DELHKGTYDF FYLPIDFKNK CNVGYAFINM ISPVHIVSFY QAFNGKKWEK FNSEKVASLA
801: YGRIQGRNAL ISHFQNSSLM NEDKRCRPIL FHSNGPETGN QEPFPNGICI HMPLDGGAGS SKEPLGFEED DNPNEIKTSG EKSMAGSL
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.