Factsheet for HORVU5Hr1G081420.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G325200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	88.66	91.59
TraesCS5A01G319000.1	Wheat	cytosol, nucleus, plasma membrane, plastid	59.01	81.2
TraesCS5B01G319500.1	Wheat	plastid	89.53	78.37
Os09t0531200-01	Rice	cytosol	41.28	43.96
HORVU6Hr1G025080.3	Barley	mitochondrion	20.93	42.11
VIT_03s0038g00390.t01	Wine grape	cytosol	15.99	39.29
PGSC0003DMT400008115	Potato	cytosol	15.12	36.11
Zm00001d006207_P001	Maize	plastid	34.88	35.93
OQU89813	Sorghum	nucleus, plastid	33.72	31.52
Solyc01g110260.1.1	Tomato	cytosol	16.28	30.11
AT1G37140.1	Thale cress	plastid	18.9	27.9
GSMUA_Achr5P05840_001	Banana	cytosol, mitochondrion, nucleus, plasma membrane	23.55	27.36
Bra035509.1-P	Field mustard	cytosol, plastid	18.9	27.2
CDY44647	Canola	nucleus, plastid	18.6	26.78
Solyc01g110240.1.1	Tomato	cytosol, peroxisome, plastid	15.41	26.5
KRH18810	Soybean	cytosol	20.64	26.39
CDY62093	Canola	nucleus, plastid	18.9	26.0
Solyc05g056360.1.1	Tomato	cytosol	24.42	25.45
Bra028677.1-P	Field mustard	nucleus, plastid	20.64	25.36
Solyc01g110200.1.1	Tomato	plastid	20.35	25.27
PGSC0003DMT400086312	Potato	cytosol, nucleus, plasma membrane, plastid	18.02	25.0
PGSC0003DMT400091031	Potato	cytosol	18.02	25.0
PGSC0003DMT400085334	Potato	peroxisome	19.48	25.0
KRH16604	Soybean	cytosol, nucleus, peroxisome	19.77	25.0
Solyc01g110230.1.1	Tomato	cytosol	18.31	24.8
PGSC0003DMT400090567	Potato	plastid	21.51	24.75
CDY14020	Canola	plastid	20.06	24.64
PGSC0003DMT400060283	Potato	cytosol	20.35	23.26
Solyc01g110210.1.1	Tomato	nucleus	17.15	22.96
Solyc01g110220.1.1	Tomato	cytosol	16.28	22.95
AT5G07930.3	Thale cress	nucleus	19.48	22.79
CDY40768	Canola	nucleus	19.77	22.52
KRH29371	Soybean	nucleus	23.55	22.01
VIT_18s0001g03840.t01	Wine grape	mitochondrion	18.9	21.45
KRH24390	Soybean	nucleus	21.51	20.96
HORVU3Hr1G091930.1	Barley	nucleus	25.87	13.15
HORVU1Hr1G000530.2	Barley	nucleus	15.41	8.94
HORVU7Hr1G000370.12	Barley	nucleus, plastid	15.7	6.08
HORVU2Hr1G071240.13	Barley	nucleus	16.57	6.06

Protein Annotations

EnsemblPlants:HORVU5Hr1G081420.2	EnsemblPlantsGene:HORVU5Hr1G081420	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:Mei2-like
InterPro:Mei2-like_Rrm_C	InterPro:RBD_domain_sf	ncoils:Coil	PANTHER:PTHR45087	PFAM:PF04059	SEG:seg
SUPFAM:SSF54928	UniParc:UPI000B47ACDC	UniProt:A0A287S073	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:564069447..564072173

Molecular Weight (calculated)

37359.0 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.216

Length

344 amino acids

Sequence
(BLAST)

001: LPPTFPQLKR KIKLAMAAAY TSRLGLPPAA HPYDDESVAC ALGHLYPTKD PFALPASCLL PPPELPLAFG LPAGGLAPVC CCADAAGAPA FPPFPWANVP
101: SPPVPPRCGI TEIDEFREVE SEDNLSPCSV LTPWRRPTPA SALPSPPPLV VGGKRAFDPT SEKTSLMICN IPNGFVKRRF MAILDQHCVH ENDNPEWRVV
201: GGGKFVRSEY DFLYIPIDFR TKYNKGYAFV NMTTATAARR LHAFLHGHRW ALAGSRKVCE VVHADIQGVD ALSAHFSSSK FPCGNKDFLP VRFGPPRDGL
301: RPTVERVIGR TVVHRPADQS AHPTPRAAQR GGKWKPGAVG NKTV

Best Arabidopsis Sequence Match ( AT3G26120.1 )
(BLAST)

001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF

Arabidopsis Description

TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.