Factsheet for TraesCS5B01G319500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G325200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	82.44	97.3
HORVU5Hr1G081420.2	Barley	mitochondrion	78.37	89.53
TraesCS5A01G319000.1	Wheat	cytosol, nucleus, plasma membrane, plastid	55.47	87.2
TraesCS7B01G269200.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	40.2	50.16
Os09t0531200-01	Rice	cytosol	36.64	44.58
VIT_03s0038g00390.t01	Wine grape	cytosol	14.25	40.0
PGSC0003DMT400008115	Potato	cytosol	13.49	36.81
Zm00001d006207_P001	Maize	plastid	31.04	36.53
OQU89813	Sorghum	nucleus, plastid	30.28	32.34
Solyc01g110260.1.1	Tomato	cytosol	14.5	30.65
GSMUA_Achr5P05840_001	Banana	cytosol, mitochondrion, nucleus, plasma membrane	20.87	27.7
AT1G37140.1	Thale cress	plastid	16.29	27.47
Bra035509.1-P	Field mustard	cytosol, plastid	16.54	27.2
Solyc01g110240.1.1	Tomato	cytosol, peroxisome, plastid	13.74	27.0
TraesCS6B01G159300.2	Wheat	plastid	27.99	26.83
CDY44647	Canola	nucleus, plastid	16.29	26.78
CDY62093	Canola	nucleus, plastid	16.79	26.4
PGSC0003DMT400091031	Potato	cytosol	16.54	26.21
PGSC0003DMT400086312	Potato	cytosol, nucleus, plasma membrane, plastid	16.29	25.81
PGSC0003DMT400085334	Potato	peroxisome	17.56	25.75
KRH18810	Soybean	cytosol	17.56	25.65
Solyc01g110230.1.1	Tomato	cytosol	16.54	25.59
Bra028677.1-P	Field mustard	nucleus, plastid	18.07	25.36
Solyc01g110200.1.1	Tomato	plastid	17.81	25.27
Solyc05g056360.1.1	Tomato	cytosol	21.12	25.15
KRH16604	Soybean	cytosol, nucleus, peroxisome	17.3	25.0
PGSC0003DMT400090567	Potato	plastid	18.83	24.75
CDY14020	Canola	plastid	17.56	24.64
Solyc01g110220.1.1	Tomato	cytosol	14.76	23.77
Solyc01g110210.1.1	Tomato	nucleus	15.52	23.74
PGSC0003DMT400060283	Potato	cytosol	17.56	22.92
AT5G07930.3	Thale cress	nucleus	17.05	22.79
CDY40768	Canola	nucleus	17.3	22.52
KRH29371	Soybean	nucleus	20.61	22.01
KRH24390	Soybean	nucleus	19.08	21.25
VIT_18s0001g03840.t01	Wine grape	mitochondrion	16.29	21.12
TraesCS3B01G447800.1	Wheat	nucleus	23.66	13.76
TraesCS1B01G008000.1	Wheat	nucleus	14.76	6.2
TraesCS2B01G304600.1	Wheat	nucleus	14.25	6.07

Protein Annotations

EnsemblPlants:TraesCS5B01G319500.1	EnsemblPlantsGene:TraesCS5B01G319500	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:Mei2-like
InterPro:Mei2-like_Rrm_C	InterPro:RBD_domain_sf	PANTHER:PTHR45087	PFAM:PF04059	SEG:seg	SUPFAM:SSF54928
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:503528752..503531185

Molecular Weight (calculated)

42111.8 Da

IEP (calculated)

9.780

GRAVY (calculated)

-0.163

Length

393 amino acids

Sequence
(BLAST)

001: MKAESTAVVP VACAAVPAVR CHLLRDTGPS RPGGASPSPP RVGPARSSFL LLFPSTNKRI MELAMAAAYT SRLGLPPAAH PYDDASLACA LGQLYSTKDP
101: FALPVSCLLP PPELPPAFGL PVGGLAPVCC CAKAAGAPAF PPFPWAHAPS PPAPPRCAIT EIDESREVES EDNLSPRSVL TPWRRPTPAS ALSPSPPLVV
201: GGKRAFDPSS EKTSLMICNI PNGFVKRRFM AILDQHCVQE NDNPGWRVVG GGKFVRSEYD FLYIPIDFRT KYNKGYAFVN MTTATAARRL HTFLHGHRWA
301: LAGSRKVCEV VHADIQGVDA LSAHFSCSKF PCGNKEFLPV RFGPPRDGLR PTVERVIGRT LVHRPADQSA RPTPHAAQRG GKSKPAAVGN KTI

Best Arabidopsis Sequence Match ( AT3G26120.1 )
(BLAST)

001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF

Arabidopsis Description

TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.