Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008115 | Potato | cytosol | 70.97 | 91.67 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 38.71 | 51.43 |
| Solyc01g110200.1.1 | Tomato | plastid | 65.59 | 44.04 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 43.55 | 40.5 |
| GSMUA_Achr11P... | Banana | cytosol | 31.18 | 36.25 |
| Solyc01g110230.1.1 | Tomato | cytosol | 45.16 | 33.07 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 28.49 | 30.99 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 28.49 | 30.11 |
| Solyc01g110210.1.1 | Tomato | nucleus | 37.63 | 27.24 |
| CDY14020 | Canola | plastid | 36.56 | 24.29 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 35.48 | 23.57 |
| CDY40768 | Canola | nucleus | 36.56 | 22.52 |
| Solyc01g110220.1.1 | Tomato | cytosol | 28.49 | 21.72 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 33.87 | 21.28 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 28.49 | 21.12 |
| AT5G07930.3 | Thale cress | nucleus | 31.18 | 19.73 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 30.11 | 17.78 |
| KRH24390 | Soybean | nucleus | 33.33 | 17.56 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 30.11 | 17.55 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 31.18 | 17.42 |
| Zm00001d006207_P001 | Maize | plastid | 31.18 | 17.37 |
| Os09t0531200-01 | Rice | cytosol | 30.11 | 17.34 |
| KRH29371 | Soybean | nucleus | 33.87 | 17.12 |
| Solyc05g056360.1.1 | Tomato | cytosol | 30.11 | 16.97 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 30.11 | 16.28 |
| Zm00001d053860_P001 | Maize | plastid | 30.11 | 16.05 |
| OQU89813 | Sorghum | nucleus, plastid | 30.65 | 15.49 |
| EES04542 | Sorghum | plastid | 27.42 | 14.7 |
| TraesCS5B01G319500.1 | Wheat | plastid | 30.65 | 14.5 |
| TraesCS6B01G159300.2 | Wheat | plastid | 30.65 | 13.9 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 29.03 | 13.88 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 12.9 | 9.6 |
| Solyc05g013930.1.1 | Tomato | nucleus | 31.72 | 9.31 |
| Solyc07g056340.2.1 | Tomato | nucleus | 24.19 | 5.58 |
| Solyc10g007770.2.1 | Tomato | nucleus, plastid | 25.27 | 5.54 |
| Solyc02g071270.1.1 | Tomato | extracellular | 23.12 | 5.08 |
| Solyc05g023740.2.1 | Tomato | nucleus | 23.12 | 4.42 |
Protein Annotations
| EnsemblPlants:Solyc01g110260.1.1 | EnsemblPlantsGene:Solyc01g110260.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:Mei2-like_Rrm_C |
| InterPro:RBD_domain_sf | PFAM:PF04059 | SUPFAM:SSF54928 | UniParc:UPI0002768F98 | UniProt:K4B3N9 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:96986058..96988801
Molecular Weight (calculated)
21919.1 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.435
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMQFLDEYC FLQNQNARNS NGEIFHVFAY DFLYLPMDYN REMLMRFLDE HCLLENQKAR DSNGENTHVF AYDFLYLPMD FKSKMNKGYA FVNFTDERTV
101: WNFFEAYDKL NVLPGSTWRV RIVTAKIQGK EALVNHFKNT RFRCESEEFL PVQFSPARDG SGESVQMISV GKYKVTPSCS DILKKP
101: WNFFEAYDKL NVLPGSTWRV RIVTAKIQGK EALVNHFKNT RFRCESEEFL PVQFSPARDG SGESVQMISV GKYKVTPSCS DILKKP
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.