Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 60.96 | 45.95 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 54.58 | 42.95 |
| Os09t0531200-01 | Rice | cytosol | 52.99 | 41.18 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 22.71 | 40.71 |
| PGSC0003DMT400008115 | Potato | cytosol | 21.12 | 36.81 |
| Zm00001d006207_P001 | Maize | plastid | 41.83 | 31.44 |
| OQU89813 | Sorghum | nucleus, plastid | 43.03 | 29.35 |
| Solyc01g110260.1.1 | Tomato | cytosol | 21.12 | 28.49 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 29.88 | 25.34 |
| PGSC0003DMT400091031 | Potato | cytosol | 24.7 | 25.0 |
| AT1G37140.1 | Thale cress | plastid | 23.11 | 24.89 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 23.51 | 24.69 |
| CDY44647 | Canola | nucleus, plastid | 23.11 | 24.27 |
| PGSC0003DMT400085334 | Potato | peroxisome | 25.9 | 24.25 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 23.9 | 24.19 |
| CDY62093 | Canola | nucleus, plastid | 23.9 | 24.0 |
| KRH18810 | Soybean | cytosol | 25.5 | 23.79 |
| Solyc01g110210.1.1 | Tomato | nucleus | 23.51 | 22.96 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 25.5 | 22.86 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 17.93 | 22.5 |
| Solyc01g110230.1.1 | Tomato | cytosol | 22.71 | 22.44 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 24.3 | 22.43 |
| Solyc01g110200.1.1 | Tomato | plastid | 24.3 | 22.02 |
| CDY14020 | Canola | plastid | 24.3 | 21.79 |
| Solyc05g056360.1.1 | Tomato | cytosol | 27.89 | 21.21 |
| CDY40768 | Canola | nucleus | 25.1 | 20.86 |
| PGSC0003DMT400090567 | Potato | plastid | 24.7 | 20.74 |
| AT5G07930.3 | Thale cress | nucleus | 22.71 | 19.39 |
| Solyc01g110220.1.1 | Tomato | cytosol | 18.33 | 18.85 |
| KRH29371 | Soybean | nucleus | 27.49 | 18.75 |
| PGSC0003DMT400060283 | Potato | cytosol | 21.91 | 18.27 |
| KRH24390 | Soybean | nucleus | 25.5 | 18.13 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 20.32 | 16.83 |
| TraesCS3D01G407900.1 | Wheat | nucleus | 32.67 | 12.01 |
| TraesCS7D01G003000.1 | Wheat | plastid | 21.12 | 6.09 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 22.31 | 6.06 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 21.51 | 5.75 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G325300.1 | EnsemblPlantsGene:TraesCS5D01G325300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:Mei2-like |
| InterPro:Mei2-like_Rrm_C | InterPro:RBD_domain_sf | PANTHER:PTHR45087 | PFAM:PF04059 | SEG:seg | SUPFAM:SSF54928 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:416787868..416788986
Molecular Weight (calculated)
27543.4 Da
IEP (calculated)
9.979
GRAVY (calculated)
-0.192
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAYTVGVP ALPFLPWLHM PPPPPFPMAL YYNPALKPPL PATRCSITEI VEDGDVEPPT AEVEDGPSPR SVLAVWRRSA ALPPPSSGVA GSKPAFDGRS
101: KKTSVMICNI PNSFLKRRLM AILDQHCAEE NKLRCRPRGG GGAVAKSEYD FLYLPIDFRG YAFVNMTTPA ATRRLYAFLH GHRWAGSAKV CEVVHAHIQG
201: VDALAAHFSR SLFPCGNNKE FLPVRFGPPR DGLRQTAERT IGCAVVRRRL R
101: KKTSVMICNI PNSFLKRRLM AILDQHCAEE NKLRCRPRGG GGAVAKSEYD FLYLPIDFRG YAFVNMTTPA ATRRLYAFLH GHRWAGSAKV CEVVHAHIQG
201: VDALAAHFSR SLFPCGNNKE FLPVRFGPPR DGLRQTAERT IGCAVVRRRL R
001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
Arabidopsis Description
TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.