Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028677.1-P | Field mustard | nucleus, plastid | 56.46 | 59.29 |
| CDY14020 | Canola | plastid | 55.44 | 58.21 |
| CDY40768 | Canola | nucleus | 56.46 | 54.97 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 20.75 | 43.57 |
| PGSC0003DMT400008115 | Potato | cytosol | 17.01 | 34.72 |
| GSMUA_Achr11P... | Banana | cytosol | 18.37 | 33.75 |
| Solyc01g110260.1.1 | Tomato | cytosol | 19.73 | 31.18 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 18.03 | 30.99 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 17.69 | 29.55 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 20.07 | 29.5 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 23.13 | 27.42 |
| Solyc01g110230.1.1 | Tomato | cytosol | 23.47 | 27.17 |
| Solyc01g110200.1.1 | Tomato | plastid | 25.17 | 26.71 |
| PGSC0003DMT400091031 | Potato | cytosol | 21.77 | 25.81 |
| PGSC0003DMT400090567 | Potato | plastid | 25.85 | 25.42 |
| PGSC0003DMT400085334 | Potato | peroxisome | 22.79 | 25.0 |
| AT1G37140.1 | Thale cress | plastid | 19.39 | 24.46 |
| Solyc01g110210.1.1 | Tomato | nucleus | 21.09 | 24.12 |
| Solyc01g110220.1.1 | Tomato | cytosol | 19.73 | 23.77 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 19.39 | 22.71 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 22.79 | 22.64 |
| KRH29371 | Soybean | nucleus | 27.89 | 22.28 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 23.81 | 22.22 |
| KRH24390 | Soybean | nucleus | 25.85 | 21.53 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 23.13 | 21.32 |
| Os09t0531200-01 | Rice | cytosol | 22.45 | 20.43 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 23.13 | 20.42 |
| Zm00001d053860_P001 | Maize | plastid | 23.47 | 19.77 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 22.79 | 19.48 |
| EES04542 | Sorghum | plastid | 22.79 | 19.31 |
| Zm00001d006207_P001 | Maize | plastid | 20.07 | 17.66 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 23.13 | 17.48 |
| TraesCS5B01G319500.1 | Wheat | plastid | 22.79 | 17.05 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.29 | 16.8 |
| OQU89813 | Sorghum | nucleus, plastid | 20.41 | 16.3 |
| TraesCS6B01G159300.2 | Wheat | plastid | 22.11 | 15.85 |
| AT1G67770.1 | Thale cress | plastid | 23.81 | 13.28 |
| AT3G26120.1 | Thale cress | nucleus | 25.51 | 12.2 |
| AT1G29400.3 | Thale cress | nucleus | 18.37 | 6.75 |
| AT5G61960.1 | Thale cress | nucleus | 18.37 | 5.9 |
| AT5G07290.1 | Thale cress | nucleus | 17.01 | 5.51 |
| AT2G42890.1 | Thale cress | nucleus | 15.65 | 5.46 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:830687 | ProteinID:AED91224.1 | ArrayExpress:AT5G07930 | EnsemblPlantsGene:AT5G07930 |
| RefSeq:AT5G07930 | TAIR:AT5G07930 | RefSeq:AT5G07930-TAIR-G | EnsemblPlants:AT5G07930.3 | TAIR:AT5G07930.3 | Unigene:At.54773 |
| UniProt:F4K9I2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0008150 |
| InterPro:IPR000504 | InterPro:IPR012677 | Symbol:MCT2 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | RefSeq:NP_001190253.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SUPFAM:SSF54928 | UniParc:UPI0001E930E2 | SEG:seg | : | : | : |
Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
Coordinates
chr5:+:2530834..2532742
Molecular Weight (calculated)
34157.3 Da
IEP (calculated)
8.696
GRAVY (calculated)
-0.720
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPDG KEKTQTPNQI QVKF
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPDG KEKTQTPNQI QVKF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.