Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 24.94 | 55.11 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 23.91 | 54.39 |
| TraesCS6B01G159300.2 | Wheat | plastid | 44.73 | 42.44 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 13.88 | 38.57 |
| PGSC0003DMT400008115 | Potato | cytosol | 13.11 | 35.42 |
| Os09t0531200-01 | Rice | cytosol | 26.99 | 32.51 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 23.65 | 31.08 |
| AT1G37140.1 | Thale cress | plastid | 18.25 | 30.47 |
| Zm00001d053860_P001 | Maize | plastid | 26.99 | 30.09 |
| Solyc01g110260.1.1 | Tomato | cytosol | 13.88 | 29.03 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 14.91 | 29.0 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 17.74 | 28.87 |
| CDY44647 | Canola | nucleus, plastid | 17.48 | 28.45 |
| CDY62093 | Canola | nucleus, plastid | 18.25 | 28.4 |
| EES04542 | Sorghum | plastid | 25.19 | 28.24 |
| Solyc05g056360.1.1 | Tomato | cytosol | 22.88 | 26.97 |
| Solyc01g110230.1.1 | Tomato | cytosol | 17.48 | 26.77 |
| CDY14020 | Canola | plastid | 19.02 | 26.43 |
| KRH18810 | Soybean | cytosol | 17.99 | 26.02 |
| PGSC0003DMT400091031 | Potato | cytosol | 16.45 | 25.81 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 18.51 | 25.71 |
| Solyc01g110210.1.1 | Tomato | nucleus | 16.97 | 25.68 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 16.2 | 25.4 |
| PGSC0003DMT400085334 | Potato | peroxisome | 17.48 | 25.37 |
| PGSC0003DMT400060283 | Potato | cytosol | 19.54 | 25.25 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 17.48 | 25.0 |
| CDY40768 | Canola | nucleus | 18.77 | 24.17 |
| Solyc01g110200.1.1 | Tomato | plastid | 16.71 | 23.47 |
| KRH29371 | Soybean | nucleus | 22.11 | 23.37 |
| AT5G07930.3 | Thale cress | nucleus | 17.48 | 23.13 |
| PGSC0003DMT400090567 | Potato | plastid | 17.22 | 22.41 |
| KRH24390 | Soybean | nucleus | 20.31 | 22.38 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 17.22 | 22.11 |
| Solyc01g110220.1.1 | Tomato | cytosol | 13.62 | 21.72 |
| Os01t0907900-01 | Rice | nucleus | 22.88 | 13.03 |
| Os02t0319100-01 | Rice | nucleus | 13.88 | 6.66 |
| Os02t0719800-02 | Rice | plasma membrane | 13.88 | 6.37 |
| Os05t0102800-01 | Rice | nucleus | 13.62 | 5.55 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 13.62 | 5.29 |
Protein Annotations
| EntrezGene:107275958 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:AB244282 | ProteinID:BAD28026.1 | ProteinID:BAD28171.1 |
| ProteinID:BAS77071.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlantsGene:Os02g0157900 | EnsemblPlants:Os02t0157900-00 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR45087 | UniProt:Q6ET49 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SUPFAM:SSF54928 | UniParc:UPI00003CE5B9 | RefSeq:XP_015625077.1 | SEG:seg | : | : |
Description
OML7Hypothetical conserved gene. (Os02t0157900-00)
Coordinates
chr2:+:3158639..3160602
Molecular Weight (calculated)
42059.1 Da
IEP (calculated)
11.241
GRAVY (calculated)
-0.397
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTKLNPSA APFHCSRRHL FFAPPPPPPP PMPAYQYHAT GACAAAAPPP FPFFATYSCA SLPFHGHLYP PCGYQAQMGP APPGAAFAKG VLAAAPPPPH
101: GRPPHKLMVC KGAPTVTDVK LRAQARAAAR VGVAAAVRGW RPAPATAGPP RMLVAAAPCG MLHPAAVARR RGMSKVYKPR KPQRAGRERS PSPSPVFTTR
201: PMSPTPPMQK LKPAHTTVMV RNIPNKLTRS DMVRLLDDHC ARENRRRGRG GEPRAEYDLV YVRMDFGMCN KERSSNMGYA FVNFTTAEAA RGLQRALHGC
301: RWKRSAFDSG KIIDIRAARI QGKDALVRHF GRTTYYECDT DEYLPAVFSP PRDGSTAGAG APSPPAVKTV GIRVPPRPIT LLTHRGNVN
101: GRPPHKLMVC KGAPTVTDVK LRAQARAAAR VGVAAAVRGW RPAPATAGPP RMLVAAAPCG MLHPAAVARR RGMSKVYKPR KPQRAGRERS PSPSPVFTTR
201: PMSPTPPMQK LKPAHTTVMV RNIPNKLTRS DMVRLLDDHC ARENRRRGRG GEPRAEYDLV YVRMDFGMCN KERSSNMGYA FVNFTTAEAA RGLQRALHGC
301: RWKRSAFDSG KIIDIRAARI QGKDALVRHF GRTTYYECDT DEYLPAVFSP PRDGSTAGAG APSPPAVKTV GIRVPPRPIT LLTHRGNVN
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.