Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04542 | Sorghum | plastid | 73.64 | 74.06 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 21.2 | 43.27 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 20.34 | 40.34 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 14.9 | 37.14 |
| PGSC0003DMT400008115 | Potato | cytosol | 14.33 | 34.72 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 27.22 | 32.09 |
| AT1G37140.1 | Thale cress | plastid | 20.34 | 30.47 |
| Solyc01g110260.1.1 | Tomato | cytosol | 16.05 | 30.11 |
| Solyc01g110230.1.1 | Tomato | cytosol | 20.92 | 28.74 |
| KRH18810 | Soybean | cytosol | 21.2 | 27.51 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 18.62 | 27.2 |
| CDY14020 | Canola | plastid | 21.78 | 27.14 |
| PGSC0003DMT400091031 | Potato | cytosol | 19.2 | 27.02 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 15.47 | 27.0 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 30.09 | 26.99 |
| Solyc01g110210.1.1 | Tomato | nucleus | 19.77 | 26.85 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 21.49 | 26.79 |
| CDY44647 | Canola | nucleus, plastid | 18.34 | 26.78 |
| Solyc01g110200.1.1 | Tomato | plastid | 21.2 | 26.71 |
| Solyc05g056360.1.1 | Tomato | cytosol | 25.21 | 26.67 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 20.63 | 26.47 |
| CDY62093 | Canola | nucleus, plastid | 18.91 | 26.4 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 18.62 | 26.21 |
| Zm00001d006207_P001 | Maize | plastid | 24.36 | 25.45 |
| Solyc01g110220.1.1 | Tomato | cytosol | 17.77 | 25.41 |
| PGSC0003DMT400085334 | Potato | peroxisome | 19.48 | 25.37 |
| TraesCS6B01G159300.2 | Wheat | plastid | 29.51 | 25.12 |
| PGSC0003DMT400090567 | Potato | plastid | 21.2 | 24.75 |
| PGSC0003DMT400060283 | Potato | cytosol | 21.2 | 24.58 |
| CDY40768 | Canola | nucleus | 21.2 | 24.5 |
| AT5G07930.3 | Thale cress | nucleus | 19.77 | 23.47 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 18.91 | 21.78 |
| KRH29371 | Soybean | nucleus | 22.35 | 21.2 |
| KRH24390 | Soybean | nucleus | 20.34 | 20.11 |
| Zm00001d042445_P001 | Maize | nucleus | 29.8 | 15.66 |
| Zm00001d045611_P001 | Maize | nucleus | 19.77 | 8.15 |
| Zm00001d035869_P017 | Maize | golgi | 19.2 | 7.85 |
| Zm00001d025278_P025 | Maize | nucleus | 18.62 | 6.53 |
| Zm00001d016606_P022 | Maize | nucleus | 19.2 | 6.51 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 18.91 | 6.26 |
| Zm00001d035763_P003 | Maize | plastid | 16.91 | 6.22 |
| Zm00001d008781_P003 | Maize | nucleus | 3.15 | 5.88 |
| Zm00001d031675_P001 | Maize | nucleus | 2.29 | 5.44 |
| Zm00001d013726_P001 | Maize | nucleus | 3.44 | 5.19 |
| Zm00001d007808_P002 | Maize | nucleus | 3.44 | 3.37 |
| Zm00001d048798_P001 | Maize | nucleus | 3.15 | 3.31 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 0.86 | 0.9 |
Protein Annotations
| EnsemblPlants:Zm00001d053860_P001 | EnsemblPlants:Zm00001d053860_T001 | EnsemblPlantsGene:Zm00001d053860 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:AQK60538.1 | SEG:seg | SUPFAM:SSF54928 | UniParc:UPI00022121AC |
| UniProt:K7US77 | MapMan:35.1 | : | : | : | : |
Description
MEI2 C-terminal RRM only like 1
Coordinates
chr4:-:242400871..242404592
Molecular Weight (calculated)
37769.0 Da
IEP (calculated)
10.919
GRAVY (calculated)
-0.398
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATKLNPAA APFPCPYPYY APPPPFPLPG ACPPTLPLVT YSYVLSPQGR LGFYLPVRQY SSPPVPRKGV SAAPHHGRLP PPKVMAAFSG PCGAGKRQAA
101: APPVAAAARA QVPAAPRKPR QEAGSRSHAV APRQKAESRR SQAVAPWPRK AAGPRARLAA QREAPPPPSL YTKRPLHWVK PKPSELGECT TIMLRNIPNK
201: LRSGDLISLL DEQCAHANRA AGSVVAAYDV MYLPMDFRKE ANFGYAFINL TTPAAAKVLY CALQNCGWKV QGSKKVIRID QAAQQGKATL VRHLERMRLE
301: CDKDEFLPVQ FSPPRDGVNV PAAPCRIRVQ PLALGEGRGP RPRPRPKAA
101: APPVAAAARA QVPAAPRKPR QEAGSRSHAV APRQKAESRR SQAVAPWPRK AAGPRARLAA QREAPPPPSL YTKRPLHWVK PKPSELGECT TIMLRNIPNK
201: LRSGDLISLL DEQCAHANRA AGSVVAAYDV MYLPMDFRKE ANFGYAFINL TTPAAAKVLY CALQNCGWKV QGSKKVIRID QAAQQGKATL VRHLERMRLE
301: CDKDEFLPVQ FSPPRDGVNV PAAPCRIRVQ PLALGEGRGP RPRPRPKAA
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.