Factsheet for Zm00001d045611_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89028	Sorghum	nucleus	93.39	93.61
Zm00001d035869_P017	Maize	golgi	90.67	90.04
Os02t0719800-02	Rice	plasma membrane	79.69	79.6
TraesCS7A01G003100.1	Wheat	plastid	78.51	76.61
TraesCS4A01G495500.1	Wheat	plastid	79.22	76.6
TraesCS7D01G003000.1	Wheat	plastid	78.39	76.32
HORVU7Hr1G000370.12	Barley	nucleus, plastid	78.87	75.23
GSMUA_Achr10P...	Banana	nucleus	58.8	59.07
VIT_10s0003g02670.t01	Wine grape	nucleus	59.5	57.01
KRH12823	Soybean	nucleus	57.73	56.73
KRH37781	Soybean	nucleus	57.5	56.5
PGSC0003DMT400007982	Potato	nucleus	52.07	51.82
GSMUA_Achr4P31220_001	Banana	plastid	52.66	49.56
Solyc02g071270.1.1	Tomato	extracellular	49.35	49.35
GSMUA_Achr6P13670_001	Banana	nucleus	35.3	48.38
Zm00001d031675_P001	Maize	nucleus	7.08	40.82
GSMUA_Achr6P13690_001	Banana	golgi, plasma membrane	59.15	36.44
GSMUA_Achr3P03100_001	Banana	nucleus	56.2	35.84
GSMUA_Achr2P20130_001	Banana	nucleus	50.53	34.85
Zm00001d016606_P022	Maize	nucleus	42.15	34.69
Zm00001d050584_P034	Maize	endoplasmic reticulum, nucleus	40.73	32.73
Zm00001d025278_P025	Maize	nucleus	37.54	31.93
Zm00001d007808_P002	Maize	nucleus	12.75	30.34
Zm00001d035763_P003	Maize	plastid	32.7	29.22
Zm00001d048798_P001	Maize	nucleus	10.27	26.2
Zm00001d013726_P001	Maize	nucleus	6.26	22.94
Zm00001d008781_P003	Maize	nucleus	4.96	22.46
Zm00001d042445_P001	Maize	nucleus	15.58	19.88
Zm00001d053860_P001	Maize	plastid	8.15	19.77
Zm00001d006207_P001	Maize	plastid	6.97	17.66
Zm00001d008437_P001	Maize	mitochondrion, nucleus, plastid	5.19	13.13

Protein Annotations

EntrezGene:103638194	Gene3D:3.30.70.330	MapMan:35.1	ProteinID:AQL02819.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	UniProt:K7VTA8	InterPro:MEI2-like_RRM3
InterPro:MEI2_like_RRM1	InterPro:Mei2-like_Rrm_C	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF04059	PFscan:PS50102
PANTHER:PTHR44127	PANTHER:PTHR44127:SF5	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928
UniParc:UPI00022131D2	EnsemblPlantsGene:Zm00001d045611	EnsemblPlants:Zm00001d045611_P001	EnsemblPlants:Zm00001d045611_T001	SEG:seg	:

Description

Protein MEI2-like 5

Coordinates

chr9:+:28673728..28679490

Molecular Weight (calculated)

93521.3 Da

IEP (calculated)

6.660

GRAVY (calculated)

-0.597

Length

847 amino acids

Sequence
(BLAST)

001: MDRSSDSSNP PGLAVPAASK PPQMAANNNP WRAPLPPLLN ARAGFGGDTS LFSTSLPVLP HEKLIFADSS HGTPPMDDTL TKMKVLANDP DEKDYKFDFD
101: LRQIDDLLPD EDEFFAGITD ETEPVAQTNT TEELEEFDVF GNGGGMELDI DPVESITVGF ANSSIVDGAR CNSINPFGVP STVGTVAGEH PFGEHPSRTL
201: FVRNINSNVE DSELRSLFEQ YGDIRTLYTA TKHRGFVMIS YFDIRAARNA MRALQNKPLR RRKLDIHFSI PKENPSDKDL NQGTLVIFNL DPSVSNEEVR
301: QIFGAYGEVK EIRETPNKKH HKFIEFYDVR AAEAALRSLN KSEIAGKRIK LEPSRPGGTR RNLMQQLGHD LDQEEPRTYR HSHVGSPIAN SPPGAWAQYS
401: SPTDSNMLQA FTRSPTGNGM SPIGIPSLIS NAPKIAPIGK DSNRSKYDQV FSNGNQSVGA AFQHSHSYQD HNSEHMSSSP GTLSGPQFLW GSPKPYSEHS
501: KSPIWHPPGI GSALSSSSRT QGQGFLYSSR QASLFGSSDQ HHHHVGSAPS GAPFESHFGF LPESPETSFM KQARFGNMGN FGTGRNGGGL LLGMANRASV
601: NPGSSLIGSL TDNSSTNFRP MLSPRLGQTF YTNPPYHGIG TFGLDSSIDR VRNRRVDSSV LQADSKRQYQ LDLEKIHRGD DTRTTLMIKN IPNKYTSKML
701: LAAIDELHRG TYDFFYLPID FKNKCNVGYA FVNMISPVHI ISFYQAFNGK KWEKFNSEKV ASLAYARIQG RSALISHFQN SSLMNEDKRC RPILFNPNGQ
801: ESVHQEAFPI NGICIHMLPE DDYLDNEDGK SLNEKTGESS TDMAGSL

Best Arabidopsis Sequence Match ( AT1G29400.3 )
(BLAST)

001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS

Arabidopsis Description

ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.