Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071270.1.1 | Tomato | extracellular | 91.77 | 92.21 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 67.22 | 64.71 |
| KRH12823 | Soybean | nucleus | 64.86 | 64.04 |
| KRH37781 | Soybean | nucleus | 64.28 | 63.46 |
| PGSC0003DMT400054712 | Potato | nucleus | 56.76 | 56.89 |
| PGSC0003DMT400044564 | Potato | nucleus | 55.82 | 55.88 |
| GSMUA_Achr10P... | Banana | nucleus | 55.23 | 55.75 |
| Os02t0719800-02 | Rice | plasma membrane | 52.17 | 52.36 |
| EER89028 | Sorghum | nucleus | 51.94 | 52.31 |
| TraesCS7A01G003100.1 | Wheat | plastid | 53.35 | 52.3 |
| TraesCS7D01G003000.1 | Wheat | plastid | 53.47 | 52.3 |
| Zm00001d045611_P001 | Maize | nucleus | 51.82 | 52.07 |
| TraesCS4A01G495500.1 | Wheat | plastid | 53.47 | 51.94 |
| Zm00001d035869_P017 | Maize | golgi | 51.7 | 51.58 |
| HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 53.58 | 51.35 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 35.49 | 48.87 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 50.65 | 47.89 |
| Os02t0319100-01 | Rice | nucleus | 44.77 | 46.98 |
| PGSC0003DMT400005752 | Potato | nucleus | 42.3 | 36.89 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 55.35 | 34.25 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 49.0 | 33.96 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 52.88 | 33.89 |
| PGSC0003DMT400008115 | Potato | cytosol | 5.05 | 29.86 |
| PGSC0003DMT400027957 | Potato | nucleus | 12.81 | 22.52 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 6.46 | 22.18 |
| PGSC0003DMT400091031 | Potato | cytosol | 6.23 | 21.37 |
| PGSC0003DMT400085334 | Potato | peroxisome | 6.7 | 21.27 |
| PGSC0003DMT400090567 | Potato | plastid | 7.29 | 20.74 |
| PGSC0003DMT400060283 | Potato | cytosol | 7.05 | 19.93 |
Protein Annotations
| EntrezGene:102577704 | Gene3D:3.30.70.330 | MapMan:35.1 | ProteinID:AAT39006 | ProteinID:AAT39006.1 | EMBL:AY579889 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0040007 | GO:GO:0045836 |
| GO:GO:0045927 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M0ZTV5 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 |
| InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | EnsemblPlantsGene:PGSC0003DMG400003086 | PGSC:PGSC0003DMG400003086 |
| EnsemblPlants:PGSC0003DMT400007982 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002961B5A | RefSeq:XP_006355584.1 | SEG:seg | : |
Description
AML1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003086]
Coordinates
chr2:-:30478562..30487097
Molecular Weight (calculated)
93164.1 Da
IEP (calculated)
6.680
GRAVY (calculated)
-0.514
Length
851 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCSDLLKM PIINVSKEKG RTPWEIRPGS NSVLITNDAS LFTSSVPVLQ HEKLKVSDGD HGHQSVDDAS PSLKIIHPDV EVDVLLDDGE NRAIGSLLPD
101: DEDELLAGIM DGFDPSQFPN HTDDLEEYDI FGSGGGLELE FDGQEHLNLG ISRVSLADPD SNGAAIYGLS NGGGAVTGEH PLGEHPSRTL FVRNINSNVE
201: DSELRTLFEQ YGDIRTLYTA CKHRGFVMIS YFDIRAARTA MRALQNKPLR RRKLDIHFSI PKDNPSDKDV NQGTLVVFNL DPSVSNDDLR KVFGPYGEIK
301: EIRETPHKRH HKFIEYYDVR AAEAALRSLN KSAIAGKRIK LEPSRPGGAR RNLVLQSSQE PEQDDSWTFR HPLGSSIGNS SPGNWPQFGS PIEHGSTQSP
401: GTSPGFRSLS PTIANNLHGL ASILHSRASN TLTVAPIGNA RTMSGHADFP IGSNHGVPFA QSNSFPEPKI SQFGGTVSSF GASSTNGSAV ETLSGPQFLW
501: GSPKLQSQQS NSSARKTESL GNAFSFGGQG DRFSLSNHQK SFLNSSQHHH HHLHHVGSAP SGLPLDRHFG FYPDSSILSP GFRGMGIGPR DGSLMVNYGS
601: RTTLNAGVAV PRNMSDNASP RFGMMSSQKL GPLFLGNGHF PGHAATSFEG LTERSRTRRV DNNNGNQMDN KKLFQLDLDK IRCGEDTRTT LMIKNIPNKY
701: TSKMLLAAID EQHKGTFDFL YLPIDFKNKC NVGYAFINML SPSLIIPFYE AFNGKKWEKF NSEKVAALAY ARIQGKTALV AHFQNSSLMN EDKRCRPILF
801: HSESSELGDQ IVQEHLSSGC LHIQVCQSNE SDILGSQGSP PEDPVDELEN S
101: DEDELLAGIM DGFDPSQFPN HTDDLEEYDI FGSGGGLELE FDGQEHLNLG ISRVSLADPD SNGAAIYGLS NGGGAVTGEH PLGEHPSRTL FVRNINSNVE
201: DSELRTLFEQ YGDIRTLYTA CKHRGFVMIS YFDIRAARTA MRALQNKPLR RRKLDIHFSI PKDNPSDKDV NQGTLVVFNL DPSVSNDDLR KVFGPYGEIK
301: EIRETPHKRH HKFIEYYDVR AAEAALRSLN KSAIAGKRIK LEPSRPGGAR RNLVLQSSQE PEQDDSWTFR HPLGSSIGNS SPGNWPQFGS PIEHGSTQSP
401: GTSPGFRSLS PTIANNLHGL ASILHSRASN TLTVAPIGNA RTMSGHADFP IGSNHGVPFA QSNSFPEPKI SQFGGTVSSF GASSTNGSAV ETLSGPQFLW
501: GSPKLQSQQS NSSARKTESL GNAFSFGGQG DRFSLSNHQK SFLNSSQHHH HHLHHVGSAP SGLPLDRHFG FYPDSSILSP GFRGMGIGPR DGSLMVNYGS
601: RTTLNAGVAV PRNMSDNASP RFGMMSSQKL GPLFLGNGHF PGHAATSFEG LTERSRTRRV DNNNGNQMDN KKLFQLDLDK IRCGEDTRTT LMIKNIPNKY
701: TSKMLLAAID EQHKGTFDFL YLPIDFKNKC NVGYAFINML SPSLIIPFYE AFNGKKWEKF NSEKVAALAY ARIQGKTALV AHFQNSSLMN EDKRCRPILF
801: HSESSELGDQ IVQEHLSSGC LHIQVCQSNE SDILGSQGSP PEDPVDELEN S
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.