Factsheet for PGSC0003DMT400060283

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g056360.1.1	Tomato	cytosol	86.71	79.09
GSMUA_Achr11P...	Banana	cytosol	17.61	33.12
HORVU6Hr1G025080.3	Barley	mitochondrion	18.6	32.75
TraesCS6A01G131000.1	Wheat	mitochondrion	16.94	28.98
AT1G37140.1	Thale cress	plastid	21.93	28.33
CDY44647	Canola	nucleus, plastid	21.26	26.78
PGSC0003DMT400008115	Potato	cytosol	12.62	26.39
Bra035509.1-P	Field mustard	cytosol, plastid	20.93	26.36
CDY62093	Canola	nucleus, plastid	21.59	26.0
GSMUA_Achr5P05840_001	Banana	cytosol, mitochondrion, nucleus, plasma membrane	24.25	24.66
KRH18810	Soybean	cytosol	19.93	22.3
TraesCS5D01G325300.1	Wheat	mitochondrion, plasma membrane	18.27	21.91
Zm00001d006207_P001	Maize	plastid	24.25	21.86
KRH16604	Soybean	cytosol, nucleus, peroxisome	19.27	21.32
TraesCS7B01G269200.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	22.26	21.27
Zm00001d053860_P001	Maize	plastid	24.58	21.2
EES04542	Sorghum	plastid	24.25	21.04
TraesCS5D01G325200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	23.26	21.02
Os09t0531200-01	Rice	cytosol	22.26	20.74
PGSC0003DMT400091031	Potato	cytosol	16.94	20.56
PGSC0003DMT400085334	Potato	peroxisome	18.27	20.52
HORVU5Hr1G081420.2	Barley	mitochondrion	23.26	20.35
PGSC0003DMT400090567	Potato	plastid	19.93	20.07
TraesCS7D01G364300.1	Wheat	nucleus, plasma membrane, plastid	21.26	20.06
Os02t0157900-00	Rice	mitochondrion, plastid	25.25	19.54
VIT_18s0001g03840.t01	Wine grape	mitochondrion	18.94	18.81
PGSC0003DMT400086312	Potato	cytosol, nucleus, plasma membrane, plastid	15.28	18.55
OQU89813	Sorghum	nucleus, plastid	22.26	18.21
TraesCS5B01G319500.1	Wheat	plastid	22.92	17.56
TraesCS6B01G159300.2	Wheat	plastid	21.26	15.61
TraesCS5A01G319000.1	Wheat	cytosol, nucleus, plasma membrane, plastid	10.3	12.4
PGSC0003DMT400027957	Potato	nucleus	14.29	8.88
PGSC0003DMT400044564	Potato	nucleus	21.26	7.53
PGSC0003DMT400054712	Potato	nucleus	20.93	7.42
PGSC0003DMT400007982	Potato	nucleus	19.93	7.05
PGSC0003DMT400005752	Potato	nucleus	19.27	5.94

Protein Annotations

EnsemblPlants:PGSC0003DMT400060283	EnsemblPlantsGene:PGSC0003DMG400023450	InterPro:Mei2-like	InterPro:Mei2-like_Rrm_C	PANTHER:PTHR45087	PFAM:PF04059
PGSC:PGSC0003DMG400023450	SEG:seg	UniParc:UPI000295FA8D	UniProt:M1C5J0	MapMan:35.1	:

Description

Protein terminal ear1 homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400023450]

Coordinates

chr5:+:51836453..51839062

Molecular Weight (calculated)

34554.4 Da

IEP (calculated)

10.309

GRAVY (calculated)

-0.515

Length

301 amino acids

Sequence
(BLAST)

001: MAVLNPNAEV FKPTNKEKEV VPFLPQGNEL VVYQPPLLPF HVSQPQYHHL GYFYYYQQNV PFYWIHRDRY HQLEKTPQNQ SFLAKGEIFS DGVKKNCMWV
101: EKTHQDQSFV GKDEIFSVGM KKNWKNKKPL LPPRLMRAGE SGWKPKGFFM RKPQKETGSS ISPCKSSATI FSRNKTTVMI RNIPNQFRTK NNVGYAFVNF
201: TSGCAASEIR KVLRYFKWNS VETPTGFFSS RKICVVSWAR IQGKDQLVKH FLQSKFICDT DEYLPVVFSP PRNGSSRLTA PVTIGNLAAV PSVYSSSDTT
301: N

Best Arabidopsis Sequence Match ( AT1G37140.2 )
(BLAST)

001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGKRAN
101: LGYAFVNFTS SLAAERFRRE FENFSWDNIG FRKKICEITV AKYQGKEELT RHFRNSRFTC HTDDYLPVVL SPPSNGFTAY TLTKLGYRVG ALGGGSRNAS
201: LR

Arabidopsis Description

MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.