Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g023740.2.1 | Tomato | nucleus | 95.8 | 96.19 |
| VIT_01s0150g00090.t01 | Wine grape | nucleus | 66.29 | 65.35 |
| KRH45198 | Soybean | nucleus | 39.24 | 51.9 |
| PGSC0003DMT400054712 | Potato | nucleus | 37.81 | 43.46 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 26.13 | 43.0 |
| PGSC0003DMT400007982 | Potato | nucleus | 36.89 | 42.3 |
| PGSC0003DMT400044564 | Potato | nucleus | 35.76 | 41.06 |
| Os05t0102800-01 | Rice | nucleus | 39.45 | 40.31 |
| Zm00001d035763_P003 | Maize | plastid | 38.93 | 40.08 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 38.32 | 39.96 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 37.91 | 39.4 |
| OQU77194 | Sorghum | plastid | 32.07 | 38.26 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 37.7 | 37.98 |
| PGSC0003DMT400008115 | Potato | cytosol | 4.2 | 28.47 |
| PGSC0003DMT400027957 | Potato | nucleus | 11.78 | 23.76 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 5.53 | 21.77 |
| PGSC0003DMT400085334 | Potato | peroxisome | 5.33 | 19.4 |
| PGSC0003DMT400060283 | Potato | cytosol | 5.94 | 19.27 |
| PGSC0003DMT400090567 | Potato | plastid | 5.84 | 19.06 |
| PGSC0003DMT400091031 | Potato | cytosol | 4.82 | 18.95 |
Protein Annotations
| EntrezGene:102579060 | Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M0ZQD6 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 |
| InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | EnsemblPlantsGene:PGSC0003DMG400002248 | PGSC:PGSC0003DMG400002248 |
| EnsemblPlants:PGSC0003DMT400005752 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000294A87D | RefSeq:XP_006343182.1 | SEG:seg | : |
Description
AML1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002248]
Coordinates
chr5:-:17618114..17626705
Molecular Weight (calculated)
108056.0 Da
IEP (calculated)
6.576
GRAVY (calculated)
-0.615
Length
976 amino acids
Sequence
(BLAST)
(BLAST)
001: MRELQGLSPS SYFSEELCFR DERQVGFWKA NSLQNYHGLK SDDALQRAAV RSSPFENHIS LGSPTAKHFE HHDSHLKQDK KVNSIIERRA VGIERASHSL
101: PRALDYNVGV RSIVSTDLAS YPAEDDKISI LGGQYENGLF SSSLSELFSR KLRLPTNYSP HGHSVGAADS HYEEERFESL KELEAHAIGN LLPDDDDLLA
201: GVTDGLDYVG QPYAGDETED LDLFSSVGGM DLGEDGSSTG QQNSEYAGNY TLLLGDSNAA IGGQKPFEEN PSRTLFVRNI NSSVEDSELQ TLFEQYGDIR
301: MLYTACKHRG FVMISYYDIR ASQNAMKALQ NKPLRRRKLD IHFSIPKDNP SEKDANQGTL LVFNLDSSVS NDELHQIFGV YGKIKEIRET QHRSHHKFIE
401: FYDIRAAEAA LRALNRSDVA GKQIMIEASH PGGTRRLSQQ FPSELEQDEP GLYLQQNSPS SLATGFSVPG ALPHGGHGSS MENGSFLGRQ SASGSAINSY
501: LDNAFDCGLS FSVPNSLLRL ESKGGNQANV GETGHLQSQI NFDFRGTSGL HPHSLPEYHD GLSNGTSSIS PGGISATMNI RPLEAIENRK FSRVGPNGQP
601: VELNEVFTPN GNVNCPSPGH QYMWSNSHQS QPQGMMWPNS PTYVGGVCAS RPQQLHSVPR APSHMLNALV PINNHHVGSA PSVNPSLSLW DRRHAYAGES
701: PDASGFHPGS LGSMRMSGNS PHTLEFIPHN VFSRTGGSCI DLPMSSSNVG LHSHQQRSLM FPGRGQIIPM ISSFDSPNER MRIRRNEGNS SQTDNKKQFE
801: LDIERIARGD DKRTTLMIKN IPNKYTSKML LAAIDERHRG TYDFIYLPID FKNKCNVGYA FINMTEPTLI VPFYNAFNGK KWEKFNSEKV ASLAYARIQG
901: KSALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQVPFPM GVNMRPRSSK NRAGTSEESY QESKDFIIEE SVNESN
101: PRALDYNVGV RSIVSTDLAS YPAEDDKISI LGGQYENGLF SSSLSELFSR KLRLPTNYSP HGHSVGAADS HYEEERFESL KELEAHAIGN LLPDDDDLLA
201: GVTDGLDYVG QPYAGDETED LDLFSSVGGM DLGEDGSSTG QQNSEYAGNY TLLLGDSNAA IGGQKPFEEN PSRTLFVRNI NSSVEDSELQ TLFEQYGDIR
301: MLYTACKHRG FVMISYYDIR ASQNAMKALQ NKPLRRRKLD IHFSIPKDNP SEKDANQGTL LVFNLDSSVS NDELHQIFGV YGKIKEIRET QHRSHHKFIE
401: FYDIRAAEAA LRALNRSDVA GKQIMIEASH PGGTRRLSQQ FPSELEQDEP GLYLQQNSPS SLATGFSVPG ALPHGGHGSS MENGSFLGRQ SASGSAINSY
501: LDNAFDCGLS FSVPNSLLRL ESKGGNQANV GETGHLQSQI NFDFRGTSGL HPHSLPEYHD GLSNGTSSIS PGGISATMNI RPLEAIENRK FSRVGPNGQP
601: VELNEVFTPN GNVNCPSPGH QYMWSNSHQS QPQGMMWPNS PTYVGGVCAS RPQQLHSVPR APSHMLNALV PINNHHVGSA PSVNPSLSLW DRRHAYAGES
701: PDASGFHPGS LGSMRMSGNS PHTLEFIPHN VFSRTGGSCI DLPMSSSNVG LHSHQQRSLM FPGRGQIIPM ISSFDSPNER MRIRRNEGNS SQTDNKKQFE
801: LDIERIARGD DKRTTLMIKN IPNKYTSKML LAAIDERHRG TYDFIYLPID FKNKCNVGYA FINMTEPTLI VPFYNAFNGK KWEKFNSEKV ASLAYARIQG
901: KSALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQVPFPM GVNMRPRSSK NRAGTSEESY QESKDFIIEE SVNESN
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.