Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0150g00090.t01 | Wine grape | nucleus | 57.59 | 42.93 |
| PGSC0003DMT400005752 | Potato | nucleus | 51.9 | 39.24 |
| Solyc05g023740.2.1 | Tomato | nucleus | 51.63 | 39.2 |
| KRH59735 | Soybean | nucleus | 43.5 | 33.86 |
| KRH41056 | Soybean | nucleus | 43.22 | 33.44 |
| OQU77194 | Sorghum | plastid | 36.72 | 33.13 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 26.29 | 32.72 |
| KRH54096 | Soybean | nucleus | 42.41 | 32.37 |
| KRH63864 | Soybean | nucleus | 42.55 | 32.34 |
| KRH31364 | Soybean | cytosol, nucleus | 7.05 | 30.06 |
| Zm00001d035763_P003 | Maize | plastid | 37.67 | 29.32 |
| Os05t0102800-01 | Rice | nucleus | 36.99 | 28.59 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 35.91 | 28.31 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 35.77 | 28.11 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 35.23 | 26.83 |
| KRG98918 | Soybean | plastid | 31.03 | 26.72 |
| KRH46056 | Soybean | nucleus, plastid | 30.76 | 26.52 |
| KRH12823 | Soybean | nucleus | 30.89 | 26.45 |
| KRH37781 | Soybean | nucleus | 30.49 | 26.1 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 7.86 | 21.32 |
| KRH18810 | Soybean | cytosol | 6.91 | 18.96 |
| KRH24390 | Soybean | nucleus | 7.18 | 15.01 |
| KRG97510 | Soybean | nucleus | 10.7 | 14.66 |
| KRH29371 | Soybean | nucleus | 7.18 | 14.4 |
| KRH31365 | Soybean | nucleus | 2.71 | 6.15 |
Protein Annotations
| EMBL:ACUP02005008 | EnsemblPlants:KRH45198 | EnsemblPlantsGene:GLYMA_08G257400 | EntrezGene:100797697 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:MEI2-like_RRM3 | InterPro:Mei2-like_Rrm_C | InterPro:RBD_domain_sf | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 |
| PFAM:PF04059 | ProteinID:KRH45198 | ProteinID:KRH45198.1 | SEG:seg | SUPFAM:SSF54928 | UniParc:UPI000294ABC1 |
| UniProt:K7L8W6 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:23116669..23121921
Molecular Weight (calculated)
81780.6 Da
IEP (calculated)
6.480
GRAVY (calculated)
-0.545
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSETIDFKS FSSSLYSSED ICSSKERQAS LWKSDNMPNC YDFDQGIKTS LNVQSLSHLS DSSKVNVVAT QHESSLFSSS LSELFSRKLR LSANNALYGH
101: SVDTVASHYE EERLFDSLEE LEAQIIGNLL PSDDDLLSGV TNGLDHIIQD SSGDDTDELD LFSSVGGMDL GHDNCSSSEQ KNSEILDEAC NSQLGLRSAS
201: IAGEQPYSEH PSRTIVVRNI NSQHKESNVY LHQNSLPLKS PTSFPGLHGI SKSGKLDGGR VLGVEPAICT PSPETAFFHG VSSSVPNSLP SLVRVKSADN
301: RCEVTESGSP GQLNFDSQAA PAFHPHSLPE FHDGLANSVH HIPPEVAANI NLKTQERIDN MQFCQVNSNG RFMEFNECVF KSSGNGSCPL PGHHYKWGNS
401: YQPPGMMWPN SPSYIDGVCA ATNLPRLHGL PRSPSHMMAT VLPINGQHVP SAPFWDRRHT YAGESLGNMQ FSGNTAAHCV DFVSYNIFPH FGGNCVDLRV
501: LPKNLGVHFH NQGDLMFPRR NHMINSFETH KQRTRSRRNE GLPNLDDKKQ YELDIDRIKK GEDNRTTLMI KNIPNKYTSK MLLAAIDERH RGTYDFVYLP
601: IDFRNKCNVG YAFINMINPG LIIPFYQVFD GKKWEKFNSE KVASLAYARI QGKAALIAHF QNSSLMNEDK RCRPILFNTD GPNAGDQVPF PVGINIRNKA
701: GRVRNNTQED NLQGSRSLPN LGISKLSSDG DSHSLESD
101: SVDTVASHYE EERLFDSLEE LEAQIIGNLL PSDDDLLSGV TNGLDHIIQD SSGDDTDELD LFSSVGGMDL GHDNCSSSEQ KNSEILDEAC NSQLGLRSAS
201: IAGEQPYSEH PSRTIVVRNI NSQHKESNVY LHQNSLPLKS PTSFPGLHGI SKSGKLDGGR VLGVEPAICT PSPETAFFHG VSSSVPNSLP SLVRVKSADN
301: RCEVTESGSP GQLNFDSQAA PAFHPHSLPE FHDGLANSVH HIPPEVAANI NLKTQERIDN MQFCQVNSNG RFMEFNECVF KSSGNGSCPL PGHHYKWGNS
401: YQPPGMMWPN SPSYIDGVCA ATNLPRLHGL PRSPSHMMAT VLPINGQHVP SAPFWDRRHT YAGESLGNMQ FSGNTAAHCV DFVSYNIFPH FGGNCVDLRV
501: LPKNLGVHFH NQGDLMFPRR NHMINSFETH KQRTRSRRNE GLPNLDDKKQ YELDIDRIKK GEDNRTTLMI KNIPNKYTSK MLLAAIDERH RGTYDFVYLP
601: IDFRNKCNVG YAFINMINPG LIIPFYQVFD GKKWEKFNSE KVASLAYARI QGKAALIAHF QNSSLMNEDK RCRPILFNTD GPNAGDQVPF PVGINIRNKA
701: GRVRNNTQED NLQGSRSLPN LGISKLSSDG DSHSLESD
001: MPSDILEPRG VPTPSHFHED IRITPEKQFG FMKNNPMPEG GVDRSSNLPT SSWTSDSYQL SQQSSLSGAL PSFIPNGRTT TNDTHWESSL FSSSLSDLFS
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
Arabidopsis Description
ML4Protein MEI2-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.