CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97510	Soybean	nucleus	56.92	34.32
PGSC0003DMT400027957	Potato	nucleus	35.38	23.76
CDY01848	Canola	plastid	34.77	22.51
CDY56219	Canola	plastid	36.0	22.24
AT1G67770.1	Thale cress	plastid	35.38	21.82
CDX83589	Canola	nucleus	38.46	21.51
Bra004255.1-P	Field mustard	plastid	35.69	21.09
CDY40990	Canola	nucleus	38.15	20.26
CDX99727	Canola	nucleus	37.54	20.23
CDY13612	Canola	nucleus	37.85	20.23
Bra036347.1-P	Field mustard	plastid	33.85	20.22
Bra025185.1-P	Field mustard	nucleus	37.54	20.07
AT3G26120.1	Thale cress	nucleus	37.85	20.0
Solyc05g013930.1.1	Tomato	nucleus	38.15	19.56
GSMUA_Achr7P02820_001	Banana	cytosol, nucleus, plastid	25.54	16.44
GSMUA_Achr8P01280_001	Banana	cytoskeleton, cytosol, nucleus	28.0	15.85
GSMUA_Achr8P32080_001	Banana	nucleus	30.77	14.47
Zm00001d042445_P001	Maize	nucleus	28.92	14.16
EES01930	Sorghum	nucleus	28.92	14.11
HORVU3Hr1G091930.1	Barley	nucleus	28.92	13.88
TraesCS3A01G413400.1	Wheat	nucleus	28.31	13.53
TraesCS3D01G407900.1	Wheat	nucleus	28.31	13.47
TraesCS3B01G447800.1	Wheat	nucleus	28.0	13.46
Os01t0907900-01	Rice	nucleus	27.08	12.88
KRH29371	Soybean	nucleus	13.23	11.68
KRH16604	Soybean	cytosol, nucleus, peroxisome	9.54	11.4
KRH18810	Soybean	cytosol	9.23	11.15
KRH24390	Soybean	nucleus	12.0	11.05
KRH46056	Soybean	nucleus, plastid	26.77	10.16
KRH12823	Soybean	nucleus	26.77	10.09
KRG98918	Soybean	plastid	26.46	10.04
KRH37781	Soybean	nucleus	26.46	9.98
KRH41056	Soybean	nucleus	23.69	8.07
KRH59735	Soybean	nucleus	23.38	8.02
KRH63864	Soybean	nucleus	22.46	7.52
KRH54096	Soybean	nucleus	22.15	7.45
KRH31364	Soybean	cytosol, nucleus	2.77	5.2
KRH45198	Soybean	nucleus	6.15	2.71

Protein Annotations

Gene3D:3.30.70.330	MapMan:35.1	UniProt:A0A0R0HVD1	UniProt:A0A2K7IFS0	EMBL:ACUP02007142	EnsemblPlantsGene:GLYMA_11G2443001
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677
EnsemblPlants:KRH31365	ProteinID:KRH31365	ProteinID:KRH31365.1	ProteinID:KRH31366.1	InterPro:Mei2-like	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR45087	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI0006EDE4FA	UniParc:UPI000C875CE2	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:33813653..33814728

Molecular Weight (calculated)

36332.4 Da

IEP (calculated)

10.926

GRAVY (calculated)

-0.598

Length

325 amino acids

Sequence
(BLAST)

001: MGETGIILSF PGNLDPRAEE FRPNTINIQC QWYPLPPPLP LPLPIPLPPP NLTTSSTRSL LLTPVPLTSH SALRAELQAF GDIRALQTEA LRHGILTVHF
101: FDLRHAQSAF AAIRSMQLHF HPNPGLLSAH YVLPNSNSLP DSHNQGTLVI FNLHPNLSSD QLRRLFQPFG PIKELRDTPW KKNQRFVEFF DIRDAAKALK
201: HMNGKEIDGK QVVIEFSRPG GHTRKFFHHH SKTTVPPLNF NAPRLHSSQK KSPGSPSNST GSIDAEMGSM SLTGGEVEEQ HSSSQGPTRR NLGRKHTTLV
301: VGNTKQQQVP RSRHWKGKQA KKHET

Best Arabidopsis Sequence Match ( AT3G26120.1 )
(BLAST)

001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF

Arabidopsis Description

TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.