Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18810 | Soybean | cytosol | 76.1 | 76.95 |
| GSMUA_Achr11P... | Banana | cytosol | 22.43 | 38.12 |
| AT1G37140.1 | Thale cress | plastid | 29.78 | 34.76 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 21.69 | 34.5 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 29.04 | 33.05 |
| CDY44647 | Canola | nucleus, plastid | 28.68 | 32.64 |
| CDY62093 | Canola | nucleus, plastid | 28.68 | 31.2 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 19.85 | 30.68 |
| KRH31364 | Soybean | cytosol, nucleus | 19.12 | 30.06 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 28.31 | 26.01 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 22.43 | 24.3 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 25.37 | 21.9 |
| Solyc05g056360.1.1 | Tomato | cytosol | 26.1 | 21.52 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 23.9 | 21.45 |
| Os09t0531200-01 | Rice | cytosol | 24.63 | 20.74 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 25.37 | 20.72 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 24.26 | 20.69 |
| KRH24390 | Soybean | nucleus | 26.84 | 20.68 |
| KRH29371 | Soybean | nucleus | 27.94 | 20.65 |
| Zm00001d053860_P001 | Maize | plastid | 26.47 | 20.63 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 25.0 | 19.77 |
| Zm00001d006207_P001 | Maize | plastid | 24.26 | 19.76 |
| EES04542 | Sorghum | plastid | 25.0 | 19.6 |
| PGSC0003DMT400060283 | Potato | cytosol | 21.32 | 19.27 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 25.0 | 17.48 |
| OQU89813 | Sorghum | nucleus, plastid | 23.53 | 17.39 |
| TraesCS5B01G319500.1 | Wheat | plastid | 25.0 | 17.3 |
| TraesCS6B01G159300.2 | Wheat | plastid | 24.26 | 16.1 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.34 | 15.6 |
| KRG97510 | Soybean | nucleus | 27.94 | 14.1 |
| KRH31365 | Soybean | nucleus | 11.4 | 9.54 |
| KRH45198 | Soybean | nucleus | 21.32 | 7.86 |
| KRH37781 | Soybean | nucleus | 22.43 | 7.08 |
| KRH46056 | Soybean | nucleus, plastid | 22.06 | 7.01 |
| KRH59735 | Soybean | nucleus | 24.26 | 6.96 |
| KRH41056 | Soybean | nucleus | 24.26 | 6.92 |
| KRG98918 | Soybean | plastid | 21.69 | 6.88 |
| KRH12823 | Soybean | nucleus | 21.32 | 6.73 |
| KRH54096 | Soybean | nucleus | 23.9 | 6.72 |
| KRH63864 | Soybean | nucleus | 23.9 | 6.69 |
Protein Annotations
| EMBL:ACUP02008960 | EnsemblPlants:KRH16604 | EnsemblPlantsGene:GLYMA_14G164800 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:KRH16604 | ProteinID:KRH16604.1 | SUPFAM:SSF54928 | UniParc:UPI000296D1B8 |
| UniProt:K7M7G1 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:40684762..40687837
Molecular Weight (calculated)
31845.8 Da
IEP (calculated)
9.958
GRAVY (calculated)
-0.592
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSQYPYDYL LNPNAQLYNS TPSNQVFYDP RFISQYYVPP SFGFYPNFPF HAPITYDQNV KTDKAWASVR GRKLPAESNA RALRNRAQAV PFPNTIQEAE
101: TYSITTVMIR NIPNQFKFED LLLILDEHCF QQNKSAEDTK AWSKFDFVYL PMDYRKHAIE KRMSNLGYAF VNFTTPTAAF KFYSEFQGFE WDVTKNKKIC
201: EINVAQHQGK ANLKRIFQAK VFKCESRDFL PVLYSRGRDG LNRRIKRNYV GKHVWGLPRR TLGTSSFNPN DV
101: TYSITTVMIR NIPNQFKFED LLLILDEHCF QQNKSAEDTK AWSKFDFVYL PMDYRKHAIE KRMSNLGYAF VNFTTPTAAF KFYSEFQGFE WDVTKNKKIC
201: EINVAQHQGK ANLKRIFQAK VFKCESRDFL PVLYSRGRDG LNRRIKRNYV GKHVWGLPRR TLGTSSFNPN DV
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.