Factsheet for TraesCS7B01G269200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
nucleus 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G364300.1	Wheat	nucleus, plasma membrane, plastid	95.24	94.04
Os09t0531200-01	Rice	cytosol	47.3	46.13
TraesCS5B01G319500.1	Wheat	plastid	50.16	40.2
VIT_03s0038g00390.t01	Wine grape	cytosol	17.46	39.29
Zm00001d006207_P001	Maize	plastid	38.41	36.23
PGSC0003DMT400008115	Potato	cytosol	16.19	35.42
OQU89813	Sorghum	nucleus, plastid	38.41	32.88
Solyc01g110260.1.1	Tomato	cytosol	17.78	30.11
GSMUA_Achr5P05840_001	Banana	cytosol, mitochondrion, nucleus, plasma membrane	27.94	29.73
Bra028677.1-P	Field mustard	nucleus, plastid	24.76	27.86
AT1G37140.1	Thale cress	plastid	20.32	27.47
CDY14020	Canola	plastid	24.13	27.14
Bra035509.1-P	Field mustard	cytosol, plastid	20.32	26.78
KRH18810	Soybean	cytosol	22.54	26.39
CDY44647	Canola	nucleus, plastid	20.0	26.36
Solyc01g110200.1.1	Tomato	plastid	22.86	25.99
CDY62093	Canola	nucleus, plastid	20.32	25.6
Solyc01g110230.1.1	Tomato	cytosol	20.63	25.59
Solyc01g110240.1.1	Tomato	cytosol, peroxisome, plastid	16.19	25.5
CDY40768	Canola	nucleus	24.44	25.5
KRH16604	Soybean	cytosol, nucleus, peroxisome	21.9	25.37
Solyc05g056360.1.1	Tomato	cytosol	26.35	25.15
KRH24390	Soybean	nucleus	27.62	24.65
PGSC0003DMT400085334	Potato	peroxisome	20.95	24.63
PGSC0003DMT400091031	Potato	cytosol	19.37	24.6
PGSC0003DMT400090567	Potato	plastid	23.17	24.41
Solyc01g110220.1.1	Tomato	cytosol	18.73	24.18
AT5G07930.3	Thale cress	nucleus	22.22	23.81
PGSC0003DMT400086312	Potato	cytosol, nucleus, plasma membrane, plastid	18.41	23.39
KRH29371	Soybean	nucleus	27.3	23.37
TraesCS6B01G159300.2	Wheat	plastid	30.16	23.17
PGSC0003DMT400060283	Potato	cytosol	21.27	22.26
Solyc01g110210.1.1	Tomato	nucleus	17.46	21.4
VIT_18s0001g03840.t01	Wine grape	mitochondrion	19.68	20.46
TraesCS3B01G447800.1	Wheat	nucleus	29.21	13.61
TraesCS1B01G008000.1	Wheat	nucleus	18.73	6.3
TraesCS2B01G304600.1	Wheat	nucleus	17.14	5.85

Protein Annotations

EnsemblPlants:TraesCS7B01G269200.1	EnsemblPlantsGene:TraesCS7B01G269200	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR012677	InterPro:Mei2-like	InterPro:Mei2-like_Rrm_C	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	PANTHER:PTHR45087
PFAM:PF04059	SEG:seg	SUPFAM:SSF54928	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7B:+:493228982..493230777

Molecular Weight (calculated)

35326.4 Da

IEP (calculated)

9.538

GRAVY (calculated)

-0.449

Length

315 amino acids

Sequence
(BLAST)

001: MAVSRLNPVA SPYLPMTLAS TWCYPSPFSY PPSPPPLPPA HGWPFAYGGD WCHTVGMPSF PLQTAYGYPA PLMVYCCTAP PPPPQSATRC RITEIIEDGG
101: EVASKEEVRY ERSPRSVLTP WSREPPTSPL LPRAPLLRPP PRTSSAGPRR LQWPRLAFNP KENNTSLMIR NIPNKFMKRR FMAILDQHCA EENAKLGRDG
201: EGVRSEYDFL YVPVDFRTRF NKGYAFVNMT TAAAARRLHA HLNGHRWEAA GSKKVCDVVH ARLEGLDGLV AHFSASWFPC GGRKDFLPVR FEPPRDGVRW
301: TAEHVVGHLQ PPRSC

Best Arabidopsis Sequence Match ( AT3G26120.1 )
(BLAST)

001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF

Arabidopsis Description

TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.