Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G286200.6 | Wheat | nucleus | 99.02 | 98.92 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 98.05 | 98.05 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 91.87 | 90.21 |
| Zm00001d025278_P025 | Maize | nucleus | 64.79 | 60.04 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 63.38 | 58.44 |
| OQU81438 | Sorghum | plastid | 65.01 | 56.71 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 52.55 | 52.38 |
| GSMUA_Achr10P... | Banana | nucleus | 52.87 | 51.05 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 53.3 | 50.98 |
| GSMUA_Achr10P... | Banana | nucleus | 53.85 | 49.16 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 39.98 | 39.42 |
| TraesCS3B01G447800.1 | Wheat | nucleus | 15.6 | 21.3 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 5.85 | 17.14 |
| TraesCS6B01G159300.2 | Wheat | plastid | 6.93 | 15.61 |
| TraesCS5B01G319500.1 | Wheat | plastid | 6.07 | 14.25 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS2B01G304600 | EnsemblPlants:TraesCS2B01G304600.1 | TIGR:cd12524 | TIGR:cd12531 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:433535287..433543531
Molecular Weight (calculated)
101761.0 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.656
Length
923 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPYKLMDQK TPFGERKLLG HQRHVNLPPT PWRADQDPLQ QHDSFSKPLA LFPNARKGHL NMTQYENGLF SSSLPDIFDN KLRLTPKNGL VGQPAEKELN
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNMDDIDD DIFSTGGGME LEADENNKLL KLNGGANTGQ TGFNGLLYGE NPSRTLSIRN
201: ININVEDTEL KLLFEQYGDI RTLYTAYKHH GLVMISYYDI RSAERAMEAL QSKPFRQWKL ETHYSIPKEN PLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHG ASQNGHHKYV EFFDTRAAEA ALYALNMRDI AGKKIRLERC CAGDGKRLTL LRPPELEQEE YGACKLGNAN SLPSTYYGSV NMASMTSAGP
401: EHGISRVLRP RVQPPIHQFR EGAFLDVPSS TMQSISSPVR IATAVTHNNR STVGENGHSL GKMGGQINGH LNYGFHGVGA FNPHSLPDFR NGQSNGISCN
501: LGTISPIGVK SNSRTAEGME SRHLYKVGSA NLGGHSSGHT EAPGFSRTGS CPLHGHQVAW NNSNNSHHHT SSPMLWPNSG SFINNIPSRP PTQAHGISRS
601: SRMLENVLPV NHHVGSAPAV NPSILDRRTG YAGELMEAPS FHPGSAGSMG FSGSPHLHQL ELTSMFPQSG GNQAMSPAHI GARSPQQRGH MFHGRGHIGP
701: PPSSFDSPGE HARSRRNESC ANQSDNKRQY ELDIERIVCG EDSRTTLMIK NIPNKYTSKM LLTAIDENHK GTYDFIYLPI DFKNKCNVGY AFINMISPEH
801: IVPFYKIFHG KRWEKFNSEK VASLAYARIQ GKSSLIAHFQ NSSLMNEDKR CRPILFHSDG PNAGDQEPFP MGTHVRSRPG RSRVLSCEES HRDTLSSSAN
901: NWTPSNGGGH ASGYSKEADP TTA
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNMDDIDD DIFSTGGGME LEADENNKLL KLNGGANTGQ TGFNGLLYGE NPSRTLSIRN
201: ININVEDTEL KLLFEQYGDI RTLYTAYKHH GLVMISYYDI RSAERAMEAL QSKPFRQWKL ETHYSIPKEN PLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHG ASQNGHHKYV EFFDTRAAEA ALYALNMRDI AGKKIRLERC CAGDGKRLTL LRPPELEQEE YGACKLGNAN SLPSTYYGSV NMASMTSAGP
401: EHGISRVLRP RVQPPIHQFR EGAFLDVPSS TMQSISSPVR IATAVTHNNR STVGENGHSL GKMGGQINGH LNYGFHGVGA FNPHSLPDFR NGQSNGISCN
501: LGTISPIGVK SNSRTAEGME SRHLYKVGSA NLGGHSSGHT EAPGFSRTGS CPLHGHQVAW NNSNNSHHHT SSPMLWPNSG SFINNIPSRP PTQAHGISRS
601: SRMLENVLPV NHHVGSAPAV NPSILDRRTG YAGELMEAPS FHPGSAGSMG FSGSPHLHQL ELTSMFPQSG GNQAMSPAHI GARSPQQRGH MFHGRGHIGP
701: PPSSFDSPGE HARSRRNESC ANQSDNKRQY ELDIERIVCG EDSRTTLMIK NIPNKYTSKM LLTAIDENHK GTYDFIYLPI DFKNKCNVGY AFINMISPEH
801: IVPFYKIFHG KRWEKFNSEK VASLAYARIQ GKSSLIAHFQ NSSLMNEDKR CRPILFHSDG PNAGDQEPFP MGTHVRSRPG RSRVLSCEES HRDTLSSSAN
901: NWTPSNGGGH ASGYSKEADP TTA
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.