Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P11050_001 | Banana | nucleus | 76.67 | 75.96 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 68.93 | 71.17 |
| GSMUA_Achr10P... | Banana | nucleus | 69.14 | 65.38 |
| EES05145 | Sorghum | nucleus | 58.05 | 55.67 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 57.74 | 55.14 |
| Zm00001d016606_P022 | Maize | nucleus | 57.32 | 53.26 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 51.26 | 53.03 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 51.05 | 52.87 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 50.94 | 52.76 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 50.42 | 51.28 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 56.38 | 51.14 |
| Zm00001d031675_P001 | Maize | nucleus | 7.53 | 48.98 |
| Zm00001d008781_P003 | Maize | nucleus | 9.52 | 48.66 |
| Zm00001d025278_P025 | Maize | nucleus | 48.64 | 46.69 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 29.18 | 45.15 |
| GSMUA_Achr10P... | Banana | nucleus | 39.23 | 44.48 |
| Zm00001d007808_P002 | Maize | nucleus | 16.53 | 44.38 |
| OQU81438 | Sorghum | plastid | 48.43 | 43.76 |
| Zm00001d048798_P001 | Maize | nucleus | 14.85 | 42.77 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 37.55 | 39.89 |
| Zm00001d013726_P001 | Maize | nucleus | 9.41 | 38.96 |
| GSMUA_Achr11P... | Banana | cytosol | 5.23 | 31.25 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 37.87 | 29.48 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 39.85 | 28.69 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 41.0 | 28.51 |
| GSMUA_Achr7P02820_001 | Banana | cytosol, nucleus, plastid | 13.91 | 26.34 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 8.05 | 26.01 |
| GSMUA_Achr8P01280_001 | Banana | cytoskeleton, cytosol, nucleus | 14.64 | 24.39 |
| GSMUA_Achr8P32080_001 | Banana | nucleus | 15.79 | 21.85 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr10G18340_001 | EnsemblPlants:GSMUA_Achr10P18340_001 | EnsemblPlants:GSMUA_Achr10T18340_001 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M0RJA9 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000295E009 | SEG:seg | : | : | : |
Description
AML1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G18340_001]
Coordinates
chr10:-:25093924..25103547
Molecular Weight (calculated)
105023.0 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.524
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGVKSVSSS PFDELHKTGA SSTQWLGLPQ PCILMDQKSE SSLEHCLVGP QRMTSISTMA RVADHVSRSQ SDRLVVPPLF SKGNLMDHSE PHHENGLFSS
101: SLSDIFVRKL RLSSSIVPLD QSINSVNSNS GEDEPFESME EIEAQTIGNL LPDDDDDLVS GVIDNIGYIG RPSNGNEIDD DIFYSGGGME LESDDNINGN
201: RTSESVWGGT SNGQQEEPNG PFAGEHPYGE HPSRTLFVRN INSNVEDGEL RALFEQYGDI RMLYTTCKHR GFVMISYYDI RAARNAMRAL QNKPLRRRKL
301: DIHFSIPKDN PSDKDMNQGT LVVFNLDSSV TRDDLRQIFG IYGEIKEIRE TPHKHHHKFI EFYDVRAAEA ALRALNRSDI AGKKIKLEPS RAGGARRCLM
401: QQLSPELVQE ELTGRWQGSP KNSLPGCFGL SSLGTIIPNS LENGAIQGLN SAVRAPFTPL MGATFHGISS SVPQNLSPPV KITSISDHTN QATHADVNHS
501: MGQINFGFQG IAGFHPHSVS EYHNGVTNFF PSNSNTMSPV GIGVISRPSE GIDKRQLHKL GSGSFEGHSF DPNEAFGVSS NGSCPLHGHQ HVWNDTNAYH
601: QKTPSTMLWS NSPFISNIPS HHPSQIHGIP RAHSHTLNTV LPLHHHIGSA PLVDPSLWNS RPAYSGDSIK PPAFHPASLG SMGLSTISQL KSLELASCNI
701: FSHSGGNCLD PCISPAHVGI ASPQQRGQMF HGRNPVVHMP ASFDGPDRIK NRRNDTNTNQ CDNKKQYELD IECIICGEDS RTTLMIKNIP NKYTSKMLLA
801: AIDENHRGTY DFIYLPIDFK NKCNVGYAFI NMINPQHIIR FYQSFNGKKW EKFNSEKVAS LAYARIQGKM ALIAHFQNSS LMNEDKRCRP ILFHTDGPNA
901: GDQEPFPVGT SIRSRSGSSR TVSGGEENHQ GCLSTSTNGE ASCVASAAPG STKDSE
101: SLSDIFVRKL RLSSSIVPLD QSINSVNSNS GEDEPFESME EIEAQTIGNL LPDDDDDLVS GVIDNIGYIG RPSNGNEIDD DIFYSGGGME LESDDNINGN
201: RTSESVWGGT SNGQQEEPNG PFAGEHPYGE HPSRTLFVRN INSNVEDGEL RALFEQYGDI RMLYTTCKHR GFVMISYYDI RAARNAMRAL QNKPLRRRKL
301: DIHFSIPKDN PSDKDMNQGT LVVFNLDSSV TRDDLRQIFG IYGEIKEIRE TPHKHHHKFI EFYDVRAAEA ALRALNRSDI AGKKIKLEPS RAGGARRCLM
401: QQLSPELVQE ELTGRWQGSP KNSLPGCFGL SSLGTIIPNS LENGAIQGLN SAVRAPFTPL MGATFHGISS SVPQNLSPPV KITSISDHTN QATHADVNHS
501: MGQINFGFQG IAGFHPHSVS EYHNGVTNFF PSNSNTMSPV GIGVISRPSE GIDKRQLHKL GSGSFEGHSF DPNEAFGVSS NGSCPLHGHQ HVWNDTNAYH
601: QKTPSTMLWS NSPFISNIPS HHPSQIHGIP RAHSHTLNTV LPLHHHIGSA PLVDPSLWNS RPAYSGDSIK PPAFHPASLG SMGLSTISQL KSLELASCNI
701: FSHSGGNCLD PCISPAHVGI ASPQQRGQMF HGRNPVVHMP ASFDGPDRIK NRRNDTNTNQ CDNKKQYELD IECIICGEDS RTTLMIKNIP NKYTSKMLLA
801: AIDENHRGTY DFIYLPIDFK NKCNVGYAFI NMINPQHIIR FYQSFNGKKW EKFNSEKVAS LAYARIQGKM ALIAHFQNSS LMNEDKRCRP ILFHTDGPNA
901: GDQEPFPVGT SIRSRSGSSR TVSGGEENHQ GCLSTSTNGE ASCVASAAPG STKDSE
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.