Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025278_P025 | Maize | nucleus | 84.5 | 89.76 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 56.81 | 65.11 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 56.71 | 65.01 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 56.71 | 64.94 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 56.62 | 63.72 |
| EES05145 | Sorghum | nucleus | 56.14 | 59.58 |
| GSMUA_Achr10P... | Banana | nucleus | 48.2 | 50.45 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 43.19 | 49.35 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 44.52 | 48.81 |
| GSMUA_Achr10P... | Banana | nucleus | 43.76 | 48.43 |
| OQU77194 | Sorghum | plastid | 30.53 | 39.49 |
| EER89028 | Sorghum | nucleus | 29.58 | 37.04 |
| EES01930 | Sorghum | nucleus | 12.19 | 19.37 |
| EES04542 | Sorghum | plastid | 5.95 | 18.16 |
| OQU89813 | Sorghum | nucleus, plastid | 6.14 | 17.66 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A1Z5RCH6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlants:OQU81438 | ProteinID:OQU81438 | ProteinID:OQU81438.1 | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| EnsemblPlantsGene:SORBI_3006G058600 | SUPFAM:SSF54928 | UniParc:UPI000B8BA1C7 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:40516980..40524482
Molecular Weight (calculated)
117621.0 Da
IEP (calculated)
8.099
GRAVY (calculated)
-0.565
Length
1058 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVLGLRGVSL DFGSFARSAG LSILMRCRFL PSVPWPRFSS RTKFPCTSSS RSVVGCSARR MPTEQRRHMP PAHFLPAEPE SSSFPNELRL RPERQVGLLK
0101: QGCFPEHAGR LACPPLQKLK PIGATVVDQL DIMRPYKLMD QKVPFGLDDK LLDVKLPPSS WREDQDPANQ HDSFPKALVS PLEGRRGSLN GTQYESGLFS
0201: SSLPDIFDKK IRLTSKNRVV GQLVEKVDLN HADDEPFELT KEIETQIIGN LLPDDDDLLS GVFGDIGYNT HVNNQDEIDD DIFCTGGGME LEADGNSKSS
0301: KFNGGTSYSQ TRSIVQLNGE RPSRILFVGN IDRNIEDSEL KLMFEQYGDM QTLNASCKHH GFVMVSYYDV RSAENAMRAL QSKSLRCRKL DIHYSIPKDY
0401: PLEKDINQDM VIVNLDPSIT NDDLHQIFGV LGEIKEIHPI SDNDHYRSIE FFDVRAAEAA RYALNRSEIA GNKIKLEPGC LDGTKRLMQQ MSRVLEHERF
0501: GGCKLGSPNS PSPCFGSINM ASIRSTGTDS GTVQVLHSRV QTPTNQFQEG RSFLDLPSTT IRNRSSPVGI ATAGSQSSHH VLDEHIHSLG KMNVQNKGRM
0601: DCGFQESIAF HPHSLPDFND RLRNGIPYSC SIPPIGVKSN ARAPEAMDGR HMYKGGCGNL SNQSSAHTEA LGFSRTGSFP LHGHQLARSN SNNLHQQHSS
0701: PMLWPSTGPF TNNVSSRQLM QVHGISRAPL RMLENTIPMN HQHVGSAPAV NPSIWDRRHG YAGEMMEAPG FNPGSVGSMG FPGSTHLHQL ETNGMFPHSG
0801: GTFMDPALSP AHMSAPSPQR RGHIFHRRSH VATIPSSFDS AGERMRSRRN DSNVNQSDNK RLFELDIERI VRGEDSRTTL MIKNIPNKYT SKMLLAAIDE
0901: SHRGTYDFIY LPIDFKNKCN VGYAFINMIN PDNIVPFYKT FHGKRWEKFN SEKVASLAYA RIQGKSALVA HFQNSSLMNE DKRCRPILFH SDGPNAGDQE
1001: PFPVGSNVRS RPGRSRILSW EQNHQDIASD HTKGGTPPSR GGGTLGYIAT DTDHMAVA
0101: QGCFPEHAGR LACPPLQKLK PIGATVVDQL DIMRPYKLMD QKVPFGLDDK LLDVKLPPSS WREDQDPANQ HDSFPKALVS PLEGRRGSLN GTQYESGLFS
0201: SSLPDIFDKK IRLTSKNRVV GQLVEKVDLN HADDEPFELT KEIETQIIGN LLPDDDDLLS GVFGDIGYNT HVNNQDEIDD DIFCTGGGME LEADGNSKSS
0301: KFNGGTSYSQ TRSIVQLNGE RPSRILFVGN IDRNIEDSEL KLMFEQYGDM QTLNASCKHH GFVMVSYYDV RSAENAMRAL QSKSLRCRKL DIHYSIPKDY
0401: PLEKDINQDM VIVNLDPSIT NDDLHQIFGV LGEIKEIHPI SDNDHYRSIE FFDVRAAEAA RYALNRSEIA GNKIKLEPGC LDGTKRLMQQ MSRVLEHERF
0501: GGCKLGSPNS PSPCFGSINM ASIRSTGTDS GTVQVLHSRV QTPTNQFQEG RSFLDLPSTT IRNRSSPVGI ATAGSQSSHH VLDEHIHSLG KMNVQNKGRM
0601: DCGFQESIAF HPHSLPDFND RLRNGIPYSC SIPPIGVKSN ARAPEAMDGR HMYKGGCGNL SNQSSAHTEA LGFSRTGSFP LHGHQLARSN SNNLHQQHSS
0701: PMLWPSTGPF TNNVSSRQLM QVHGISRAPL RMLENTIPMN HQHVGSAPAV NPSIWDRRHG YAGEMMEAPG FNPGSVGSMG FPGSTHLHQL ETNGMFPHSG
0801: GTFMDPALSP AHMSAPSPQR RGHIFHRRSH VATIPSSFDS AGERMRSRRN DSNVNQSDNK RLFELDIERI VRGEDSRTTL MIKNIPNKYT SKMLLAAIDE
0901: SHRGTYDFIY LPIDFKNKCN VGYAFINMIN PDNIVPFYKT FHGKRWEKFN SEKVASLAYA RIQGKSALVA HFQNSSLMNE DKRCRPILFH SDGPNAGDQE
1001: PFPVGSNVRS RPGRSRILSW EQNHQDIASD HTKGGTPPSR GGGTLGYIAT DTDHMAVA
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.