Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016606_P022 | Maize | nucleus | 93.98 | 91.06 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 92.38 | 87.38 |
| Zm00001d008781_P003 | Maize | nucleus | 15.55 | 82.89 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 82.35 | 82.02 |
| Zm00001d048798_P001 | Maize | nucleus | 25.88 | 77.71 |
| Zm00001d007808_P002 | Maize | nucleus | 26.78 | 75.0 |
| Zm00001d031675_P001 | Maize | nucleus | 10.03 | 68.03 |
| Zm00001d013726_P001 | Maize | nucleus | 13.54 | 58.44 |
| GSMUA_Achr10P... | Banana | nucleus | 59.18 | 58.36 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 54.16 | 58.32 |
| GSMUA_Achr10P... | Banana | nucleus | 55.67 | 58.05 |
| OQU81438 | Sorghum | plastid | 59.58 | 56.14 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 54.26 | 56.06 |
| OQU77194 | Sorghum | plastid | 36.51 | 44.5 |
| EER89028 | Sorghum | nucleus | 36.51 | 43.08 |
| EES01930 | Sorghum | nucleus | 13.54 | 20.27 |
| EES04542 | Sorghum | plastid | 6.62 | 19.02 |
| OQU89813 | Sorghum | nucleus, plastid | 6.12 | 16.58 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:8059600 | UniProt:C5XT88 | EnsemblPlants:EES05145 | ProteinID:EES05145 |
| ProteinID:EES05145.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | EnsemblPlantsGene:SORBI_3004G158400 | SUPFAM:SSF54928 | unigene:Sbi.15964 | UniParc:UPI0001A85673 | RefSeq:XP_002452169.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:50462654..50471075
Molecular Weight (calculated)
110072.0 Da
IEP (calculated)
7.012
GRAVY (calculated)
-0.694
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSQVMDPRR HLSQFSNPTL AASSFSEEQL RLPTERQVGF WKQESLHHIG SKSVASSPIE KPQPIGTKTV ARIDPQPYKL RDQKTAFSLE HKTFGQERHV
101: NLPPSLWRTD QDPNLQSDSS LFPDGRRTNP NEAYNENGLF SSSLSEIFDR KLGLRSKDVL LRQPVEKVDP THVDEEPFEL TEEIEAQIIG NILPDDDDLL
201: SGVLDVGYTA HANNGDDVDD DIFYTGGGME LETDENKKNT ETNGGANDGL GLLNGTMNGE HPYGEHPSRT LFVRNINSNV EDSELRLLFE HYGEISNLYT
301: ACKHRGFVMI SYYDIRSAWN AMRALQNKPL RRRKLDIHYS IPKDNPSEKD INQGMLVVFN VDPSVTNNDI HQIFSDYGEI KEIRDAPQKG HHKIIEFYDV
401: RAAESAVRAL NRSDLAGKKI KLETGRLSAA RRLTQHMSKE LGQEEFGVCK LGSPSTNSPP LASLGSSNMA AMTSSGRENG SIHGLHSGLL TSMSPFREAS
501: FPGLSSTIPQ SLSSPIGIAS AATHSSQASL GELSHSLSRM NGHMNYGFQG MGALHPHSLP EVHNGANNGT PYNLNTMAPI GVNSNSRTAE AVDSRHLHKV
601: GSGNLSGHSF DRVGEGAMGF SRSGSGPVRG HQLMWNNSNN FHRHPNSPVL WQNPGSFVNN VPSRPPAQMH GVPRAPSHMI ENVLPMHHHH VGSAPAINPS
701: LWDRRHGYAG ELTEASSFHP GSVGSMGFPG SPQLHGLELN SIFSHTSGNR MDPTVSSAQI SAPSPQQRGP MFHGRNPMVP LPSFDSPGER MRSRRNDSGA
801: NQSDNKRQYE LDVDRIMRGE DSRTTLMIKN IPNKYTSKML LAAIDESHKG TYDFIYLPID FKNKCNVGYA FINMTNPQHI IPFYQTFNGK KWEKFNSEKV
901: ASLAYARIQG KTALIAHFQN SSLMNEDKRC RPILFHSEGP NAGDQEPFPM GTNIRARSGR SRTSSGEENH HDIQTVLTNG DTSSNGADAS GSTKDTE
101: NLPPSLWRTD QDPNLQSDSS LFPDGRRTNP NEAYNENGLF SSSLSEIFDR KLGLRSKDVL LRQPVEKVDP THVDEEPFEL TEEIEAQIIG NILPDDDDLL
201: SGVLDVGYTA HANNGDDVDD DIFYTGGGME LETDENKKNT ETNGGANDGL GLLNGTMNGE HPYGEHPSRT LFVRNINSNV EDSELRLLFE HYGEISNLYT
301: ACKHRGFVMI SYYDIRSAWN AMRALQNKPL RRRKLDIHYS IPKDNPSEKD INQGMLVVFN VDPSVTNNDI HQIFSDYGEI KEIRDAPQKG HHKIIEFYDV
401: RAAESAVRAL NRSDLAGKKI KLETGRLSAA RRLTQHMSKE LGQEEFGVCK LGSPSTNSPP LASLGSSNMA AMTSSGRENG SIHGLHSGLL TSMSPFREAS
501: FPGLSSTIPQ SLSSPIGIAS AATHSSQASL GELSHSLSRM NGHMNYGFQG MGALHPHSLP EVHNGANNGT PYNLNTMAPI GVNSNSRTAE AVDSRHLHKV
601: GSGNLSGHSF DRVGEGAMGF SRSGSGPVRG HQLMWNNSNN FHRHPNSPVL WQNPGSFVNN VPSRPPAQMH GVPRAPSHMI ENVLPMHHHH VGSAPAINPS
701: LWDRRHGYAG ELTEASSFHP GSVGSMGFPG SPQLHGLELN SIFSHTSGNR MDPTVSSAQI SAPSPQQRGP MFHGRNPMVP LPSFDSPGER MRSRRNDSGA
801: NQSDNKRQYE LDVDRIMRGE DSRTTLMIKN IPNKYTSKML LAAIDESHKG TYDFIYLPID FKNKCNVGYA FINMTNPQHI IPFYQTFNGK KWEKFNSEKV
901: ASLAYARIQG KTALIAHFQN SSLMNEDKRC RPILFHSEGP NAGDQEPFPM GTNIRARSGR SRTSSGEENH HDIQTVLTNG DTSSNGADAS GSTKDTE
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.