Factsheet for Zm00001d031675_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048798_P001	Maize	nucleus	95.24	42.17
Zm00001d007808_P002	Maize	nucleus	94.56	39.04
Zm00001d013726_P001	Maize	nucleus	51.02	32.47
Zm00001d008781_P003	Maize	nucleus	36.73	28.88
Zm00001d016606_P022	Maize	nucleus	71.43	10.2
EES05145	Sorghum	nucleus	68.03	10.03
Os02t0517531-01	Rice	nucleus, plasma membrane	59.18	8.69
Zm00001d050584_P034	Maize	endoplasmic reticulum, nucleus	61.9	8.63
GSMUA_Achr10P...	Banana	nucleus	52.38	7.62
GSMUA_Achr10P...	Banana	nucleus	48.98	7.53
GSMUA_Achr2P21440_001	Banana	mitochondrion, nucleus	46.94	7.45
GSMUA_Achr6P11050_001	Banana	nucleus	46.94	7.15
Zm00001d045611_P001	Maize	nucleus	40.82	7.08
Zm00001d035869_P017	Maize	golgi	40.14	6.92
Zm00001d025278_P025	Maize	nucleus	44.22	6.53
Zm00001d008437_P001	Maize	mitochondrion, nucleus, plastid	14.29	6.27
Zm00001d035763_P003	Maize	plastid	34.01	5.27
Zm00001d042445_P001	Maize	nucleus	19.05	4.22
Zm00001d053860_P001	Maize	plastid	5.44	2.29
Zm00001d006207_P001	Maize	plastid	2.04	0.9

Protein Annotations

EnsemblPlants:Zm00001d031675_P001	EnsemblPlants:Zm00001d031675_T001	EnsemblPlantsGene:Zm00001d031675	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44127	PANTHER:PTHR44127:SF1	PFAM:PF00076	PFscan:PS50102	ProteinID:ONM03435.1
SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI000842B462	UniProt:A0A1D6KKJ1	MapMan:35.1	:

Description

No Description!

Coordinates

chr1:+:198288147..198289508

Molecular Weight (calculated)

16412.3 Da

IEP (calculated)

6.394

GRAVY (calculated)

-0.486

Length

147 amino acids

Sequence
(BLAST)

001: MGCFHSTAKR QHPGYEDPVH LASQTSFSVS EVEALFELFK SISRSVIDDG LINMDNPSEK DINQGMLVIF NVDPSITNND IHQIFSEYGD IKEIHDAPQK
101: GHHKIIEFYN VRAAEGAARA LNRSDLAGKK IKLETGRLSG ARRFSEP

Best Arabidopsis Sequence Match ( AT1G29400.1 )
(BLAST)

001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS

Arabidopsis Description

ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.