Factsheet for Zm00001d035869_P017

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 3
golgi 5
plasma membrane 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89028	Sorghum	nucleus	92.26	93.14
Zm00001d045611_P001	Maize	nucleus	90.04	90.67
Os02t0719800-02	Rice	plasma membrane	79.84	80.31
TraesCS7A01G003100.1	Wheat	plastid	77.73	76.38
TraesCS7D01G003000.1	Wheat	plastid	77.61	76.09
TraesCS4A01G495500.1	Wheat	plastid	77.84	75.8
HORVU7Hr1G000370.12	Barley	nucleus, plastid	77.61	74.55
GSMUA_Achr10P...	Banana	nucleus	57.68	58.36
KRH12823	Soybean	nucleus	56.74	56.15
KRH37781	Soybean	nucleus	56.62	56.03
VIT_10s0003g02670.t01	Wine grape	nucleus	58.03	56.0
PGSC0003DMT400007982	Potato	nucleus	51.58	51.7
Solyc02g071270.1.1	Tomato	extracellular	49.47	49.82
GSMUA_Achr4P31220_001	Banana	plastid	52.52	49.78
GSMUA_Achr6P13670_001	Banana	nucleus	34.7	47.9
Zm00001d031675_P001	Maize	nucleus	6.92	40.14
GSMUA_Achr6P13690_001	Banana	golgi, plasma membrane	58.38	36.22
GSMUA_Achr3P03100_001	Banana	nucleus	55.92	35.92
GSMUA_Achr2P20130_001	Banana	nucleus	50.29	34.93
Zm00001d016606_P022	Maize	nucleus	41.27	34.21
Zm00001d050584_P034	Maize	endoplasmic reticulum, nucleus	39.98	32.35
Zm00001d025278_P025	Maize	nucleus	36.34	31.12
Zm00001d007808_P002	Maize	nucleus	12.78	30.62
Zm00001d035763_P003	Maize	plastid	31.89	28.69
Zm00001d048798_P001	Maize	nucleus	10.2	26.2
Zm00001d013726_P001	Maize	nucleus	6.45	23.81
Zm00001d008781_P003	Maize	nucleus	4.92	22.46
Zm00001d042445_P001	Maize	nucleus	15.24	19.58
Zm00001d053860_P001	Maize	plastid	7.85	19.2
Zm00001d006207_P001	Maize	plastid	6.8	17.37
Zm00001d008437_P001	Maize	mitochondrion, nucleus, plastid	5.51	14.03

Protein Annotations

EntrezGene:103629361	Gene3D:3.30.70.330	MapMan:35.1	UniProt:A0A1D6LJ43	ProteinID:AQK79794.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:MEI2-like_RRM3
InterPro:MEI2_like_RRM1	InterPro:Mei2-like_Rrm_C	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF04059	PFscan:PS50102
PANTHER:PTHR44127	PANTHER:PTHR44127:SF5	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928
SignalP:SignalP-noTM	UniParc:UPI0008426C99	EnsemblPlantsGene:Zm00001d035869	EnsemblPlants:Zm00001d035869_P017	EnsemblPlants:Zm00001d035869_T017	SEG:seg

Description

Protein MEI2-like 5

Coordinates

chr6:-:57749779..57754783

Molecular Weight (calculated)

94379.9 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.537

Length

853 amino acids

Sequence
(BLAST)

001: MFSACVFVKC ITLYKIVSGL VVPATSKSRQ MAANNNPWRV PMPPLLNVRA GFGDTSLFST SLPVLPHEKL IFSHSSHGTP SKDDASAKMK VLADDPDEKD
101: YKFDFDLRQI DDLLPDEDEF FAGITDETEP IGQTNTTEEL EEFDVFGNGG GMELDIDPVE TITVSFANSS IVDGARGNGI NPFGVPNTVG TVAGEHPFGE
201: HPSRTLFVRN INSNVEDSEL RSLFEQYGDI RTLYTATKHR GFVMISYFDI RAARNAMRAL QNKPLRRRKL DIHFSIPKEN PSDKDLNQGT LVIFNLDPSV
301: SNEEVRQIFG AYGEVKEIRE TPNKKHHKFI EFYDVRAAEA ALRSLNKSEI AGKRIKLEPS RPGGTRRNLM QQLGHDLDQE EPRSYRHPHV GSPIANSPPG
401: AWAHYSSPTD NNMLQAFTRS PTGNGMSPIG MPSLISNAPK IAPIGKDSNR SKYDQVFSNG NQSLGAAFQH SHSYQDHNSE QMSSSPGTLS GPQFLWGSPK
501: PYSEHSKSPI WRPPANGPAL SSSSRTQGQG FLYSSRQASL FGSLDQHHHH VGSAPSGAPF ENHFGFLSES PETSYMKQLK FGNMGNVGIG RNGGGLMLGM
601: ASHASVNPGS SLIGSLTDNV SSSFRPILSP RLGQAFYTNP PYHGPGTFGL DSSIDHARNR RVDSSVLQAD SKRQYLLDLE KIRRGDDTRT TLMIKNIPNK
701: YTSKMLLAAI DELHKGIYDF FYLPIDFKNK CNVGYAFINM VSPVHIISFY QAFNGKKWEK FNSEKVASLA YARIQGRSAL ISHFQNSSLM NEDKRCRPIL
801: FNPNGQDSVN QEAFPINGIC IHMPLEDDCL DNEENKSLNE KTGENSTDIA GSL

Best Arabidopsis Sequence Match ( AT1G29400.3 )
(BLAST)

001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS

Arabidopsis Description

ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.