Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008781_P003 | Maize | nucleus | 50.65 | 62.57 |
| Zm00001d031675_P001 | Maize | nucleus | 32.47 | 51.02 |
| Zm00001d048798_P001 | Maize | nucleus | 69.26 | 48.19 |
| Zm00001d007808_P002 | Maize | nucleus | 61.9 | 40.17 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 41.13 | 28.36 |
| Zm00001d016606_P022 | Maize | nucleus | 62.77 | 14.09 |
| EES05145 | Sorghum | nucleus | 58.44 | 13.54 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 56.28 | 12.33 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 51.52 | 11.89 |
| GSMUA_Achr10P... | Banana | nucleus | 38.96 | 9.41 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 38.53 | 9.22 |
| GSMUA_Achr10P... | Banana | nucleus | 38.96 | 8.9 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 35.5 | 8.86 |
| Zm00001d025278_P025 | Maize | nucleus | 35.5 | 8.23 |
| Zm00001d035763_P003 | Maize | plastid | 31.17 | 7.59 |
| Zm00001d035869_P017 | Maize | golgi | 23.81 | 6.45 |
| Zm00001d045611_P001 | Maize | nucleus | 22.94 | 6.26 |
| Zm00001d053860_P001 | Maize | plastid | 5.19 | 3.44 |
| Zm00001d042445_P001 | Maize | nucleus | 9.52 | 3.31 |
| Zm00001d006207_P001 | Maize | plastid | 1.3 | 0.9 |
Protein Annotations
| EnsemblPlants:Zm00001d013726_P001 | EnsemblPlants:Zm00001d013726_T001 | EnsemblPlantsGene:Zm00001d013726 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | ProteinID:AQK64244.1 |
| UniParc:UPI000842BCCF | UniProt:A0A1D6GLQ6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5:-:18678541..18680926
Molecular Weight (calculated)
25202.0 Da
IEP (calculated)
8.917
GRAVY (calculated)
-0.195
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFHSTAKR QHPGYEDPVH LASQTSCSIR LFKSISGSVI DDGLINKGHH KIIEFYDVRA AEGAARALNR SDLAGKKIKL ETGRLSGARR CVDDIFNTAH
101: VQGVGQEEFG VYNLDVQAQI ALHCLHWRGF ISGSIIYPTT SLSSPIGIAS AATHSNHSLS RMNRHVNYGF QGLGAIHPHS LPDVHNGANN GTPYNLNTIT
201: PVVSIRTQEQ LKQLTADIFI KWVLAISMGT H
101: VQGVGQEEFG VYNLDVQAQI ALHCLHWRGF ISGSIIYPTT SLSSPIGIAS AATHSNHSLS RMNRHVNYGF QGLGAIHPHS LPDVHNGANN GTPYNLNTIT
201: PVVSIRTQEQ LKQLTADIFI KWVLAISMGT H
001: MGCFHSTAAR EFPDHENPVK LASETAFSVS EVEALYELFK SISSSVVDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQVYLLS ITSLFSVKRK TVL
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQVYLLS ITSLFSVKRK TVL
Arabidopsis Description
CBL9Calcineurin B-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.