Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031675_P001 | Maize | nucleus | 42.17 | 95.24 |
| Zm00001d008781_P003 | Maize | nucleus | 52.41 | 93.05 |
| Zm00001d007808_P002 | Maize | nucleus | 89.76 | 83.71 |
| Zm00001d013726_P001 | Maize | nucleus | 48.19 | 69.26 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 61.75 | 61.19 |
| Zm00001d016606_P022 | Maize | nucleus | 85.54 | 27.6 |
| EES05145 | Sorghum | nucleus | 77.71 | 25.88 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 74.7 | 23.53 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 65.06 | 21.58 |
| GSMUA_Achr10P... | Banana | nucleus | 46.39 | 15.23 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 41.87 | 15.01 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 43.37 | 14.92 |
| GSMUA_Achr10P... | Banana | nucleus | 42.77 | 14.85 |
| Zm00001d025278_P025 | Maize | nucleus | 42.17 | 14.06 |
| Zm00001d035763_P003 | Maize | plastid | 34.04 | 11.92 |
| Zm00001d045611_P001 | Maize | nucleus | 26.2 | 10.27 |
| Zm00001d035869_P017 | Maize | golgi | 26.2 | 10.2 |
| Zm00001d042445_P001 | Maize | nucleus | 9.64 | 4.82 |
| Zm00001d053860_P001 | Maize | plastid | 3.31 | 3.15 |
| Zm00001d006207_P001 | Maize | plastid | 1.51 | 1.5 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A1D6PQ61 | ProteinID:AQK48928.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000845426F | EnsemblPlantsGene:Zm00001d048798 | EnsemblPlants:Zm00001d048798_P001 | EnsemblPlants:Zm00001d048798_T001 | SEG:seg |
Description
Protein MEI2-like 1
Coordinates
chr4:-:5677103..5679695
Molecular Weight (calculated)
35833.0 Da
IEP (calculated)
7.568
GRAVY (calculated)
-0.436
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFHSTAKR QHPGYEDPVH LASQTSFSVS EVEALFKLFK SISGSVIDDG LINKDNPSEK DINQGMLVIF NVDPSITNND IHQIFSEYGD IKEIHDAPQK
101: GHHKIIEFYD VRAAEGAARA LNRSDLACKK IKLETGRLSG ARRSTQHMSK ELGQEEFGVY NLGSPSTNSP SLPSLGSSNI VAMTSCGREN GSMHGLHSGL
201: LTSMSPFREA SFLGLSSTLP QSLSSPIGIA SAATHSNQAP LGELSHSLSR MNRHVNYGFQ GLGAIHPHSL PDVHNGANNG TPYNLNTITP VGVNKNSRTV
301: EAVDSRHLHK VGSGNLNGRS FDRAGEGVVK WW
101: GHHKIIEFYD VRAAEGAARA LNRSDLACKK IKLETGRLSG ARRSTQHMSK ELGQEEFGVY NLGSPSTNSP SLPSLGSSNI VAMTSCGREN GSMHGLHSGL
201: LTSMSPFREA SFLGLSSTLP QSLSSPIGIA SAATHSNQAP LGELSHSLSR MNRHVNYGFQ GLGAIHPHSL PDVHNGANNG TPYNLNTITP VGVNKNSRTV
301: EAVDSRHLHK VGSGNLNGRS FDRAGEGVVK WW
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.