Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G003100.1 | Wheat | plastid | 98.28 | 98.5 |
| TraesCS4A01G495500.1 | Wheat | plastid | 97.47 | 96.8 |
| HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 97.13 | 95.16 |
| Os02t0719800-02 | Rice | plasma membrane | 80.0 | 82.08 |
| EER89028 | Sorghum | nucleus | 77.82 | 80.12 |
| Zm00001d045611_P001 | Maize | nucleus | 76.32 | 78.39 |
| Zm00001d035869_P017 | Maize | golgi | 76.09 | 77.61 |
| GSMUA_Achr10P... | Banana | nucleus | 56.32 | 58.13 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 58.28 | 57.35 |
| KRH37781 | Soybean | nucleus | 54.71 | 55.22 |
| KRH12823 | Soybean | nucleus | 54.6 | 55.1 |
| PGSC0003DMT400007982 | Potato | nucleus | 52.3 | 53.47 |
| Solyc02g071270.1.1 | Tomato | extracellular | 49.66 | 51.0 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 50.92 | 49.22 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 34.94 | 49.19 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 57.59 | 36.44 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 54.6 | 35.77 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 50.11 | 35.5 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 36.9 | 34.74 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 34.25 | 31.74 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 6.09 | 21.12 |
| TraesCS3D01G407900.1 | Wheat | nucleus | 15.4 | 19.62 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 6.44 | 17.55 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 6.44 | 16.82 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS7D01G003000 | EnsemblPlants:TraesCS7D01G003000.1 | TIGR:cd12524 | TIGR:cd12529 |
| TIGR:cd12531 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:1959850..1964263
Molecular Weight (calculated)
95347.2 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.659
Length
870 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSPAPLSP PGFAVPLAVK KRQQAAPGYS SSSSPWGVPP APPLTNNNNP NPPNGLRAGD TSIFSTSLPV LPHEKLNFPD SAHGTPSMDD ASAKLKDFDD
101: DPQGNDYPFD FDLRQIDDLL PDEDELFAGI TNEMEPSSQA NPVEELEEFD VFGSGGGMEL DSDPLDSITA GLGNASISDG IRANGVNNNF GLSNSPGAVA
201: GEHPLGEHPS RTLFVRNINS NVEDSELRSL FEQFGDIRTL YTATKHRGFV MISYFDIRAA RGAMRSLQNK PLRRRKLDIH FSIPKENPSD KDLNQGTLVI
301: FNLDPSVSNE EVRQIFGTYG EVKEIRETPN KKHHKFIEFY DVRAAEAALR SLNKSEIAGK RIKLEPSRPG GTRRSLVQHL GHELEDETRG YRHSPHVGSP
401: MANSPPGAWA QYGSPTDNNL LHAFSNSPTG NGMSPIGMSP SMMSNALKIA PIGKDNNWSK YDQVFSNSNQ SLGAAFQHSQ SYQDRKSEHM SSSPGTLTGP
501: EFLWGSPKPY PEHSQSSSMW RPPPVGHAMS SSSRPQGQGF LYGSRQASLF GSLDQNRHHV GSAPSGAPFE SHFGFLPESP ETSFMNQVRF ANMGNIGGAN
601: RNGGSLMLNM ASRASLNPVS ALSGSLTDNN STNFRPIPSP RLGQPPFFGN TTYQGPGYYG LDSSSIERGR NRRVDSSAFQ ADSKKQYQLD LDKIRKGEDT
701: RTTLMIKNIP NKYTSKMLLA AIDELHKGTY DFFYLPIDFK NKCNVGYAFI NMISPVHIVS FYQAFNGKKW EKFNSEKVAS LAYGRIQGRN ALISHFQNSS
801: LMNEDKRCRP ILFHSNGPET GNQEPFPNGI CIHMPLDGGA GSSKEPLGFE EDDNPSEIKI SGEKSMAGSL
101: DPQGNDYPFD FDLRQIDDLL PDEDELFAGI TNEMEPSSQA NPVEELEEFD VFGSGGGMEL DSDPLDSITA GLGNASISDG IRANGVNNNF GLSNSPGAVA
201: GEHPLGEHPS RTLFVRNINS NVEDSELRSL FEQFGDIRTL YTATKHRGFV MISYFDIRAA RGAMRSLQNK PLRRRKLDIH FSIPKENPSD KDLNQGTLVI
301: FNLDPSVSNE EVRQIFGTYG EVKEIRETPN KKHHKFIEFY DVRAAEAALR SLNKSEIAGK RIKLEPSRPG GTRRSLVQHL GHELEDETRG YRHSPHVGSP
401: MANSPPGAWA QYGSPTDNNL LHAFSNSPTG NGMSPIGMSP SMMSNALKIA PIGKDNNWSK YDQVFSNSNQ SLGAAFQHSQ SYQDRKSEHM SSSPGTLTGP
501: EFLWGSPKPY PEHSQSSSMW RPPPVGHAMS SSSRPQGQGF LYGSRQASLF GSLDQNRHHV GSAPSGAPFE SHFGFLPESP ETSFMNQVRF ANMGNIGGAN
601: RNGGSLMLNM ASRASLNPVS ALSGSLTDNN STNFRPIPSP RLGQPPFFGN TTYQGPGYYG LDSSSIERGR NRRVDSSAFQ ADSKKQYQLD LDKIRKGEDT
701: RTTLMIKNIP NKYTSKMLLA AIDELHKGTY DFFYLPIDFK NKCNVGYAFI NMISPVHIVS FYQAFNGKKW EKFNSEKVAS LAYGRIQGRN ALISHFQNSS
801: LMNEDKRCRP ILFHSNGPET GNQEPFPNGI CIHMPLDGGA GSSKEPLGFE EDDNPSEIKI SGEKSMAGSL
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.