Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 94.04 | 95.24 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 42.95 | 54.58 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 49.22 | 47.15 |
| Os09t0531200-01 | Rice | cytosol | 47.34 | 46.75 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 17.24 | 39.29 |
| Zm00001d006207_P001 | Maize | plastid | 38.24 | 36.53 |
| PGSC0003DMT400008115 | Potato | cytosol | 15.99 | 35.42 |
| OQU89813 | Sorghum | nucleus, plastid | 38.56 | 33.42 |
| Solyc01g110260.1.1 | Tomato | cytosol | 17.55 | 30.11 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 27.27 | 29.39 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 24.45 | 27.86 |
| CDY14020 | Canola | plastid | 23.82 | 27.14 |
| AT1G37140.1 | Thale cress | plastid | 19.75 | 27.04 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 19.75 | 26.36 |
| KRH18810 | Soybean | cytosol | 21.94 | 26.02 |
| CDY44647 | Canola | nucleus, plastid | 19.44 | 25.94 |
| Solyc01g110200.1.1 | Tomato | plastid | 22.26 | 25.63 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 15.99 | 25.5 |
| CDY40768 | Canola | nucleus | 24.14 | 25.5 |
| CDY62093 | Canola | nucleus, plastid | 19.75 | 25.2 |
| Solyc01g110230.1.1 | Tomato | cytosol | 20.06 | 25.2 |
| PGSC0003DMT400090567 | Potato | plastid | 23.2 | 24.75 |
| KRH24390 | Soybean | nucleus | 27.27 | 24.65 |
| PGSC0003DMT400085334 | Potato | peroxisome | 20.69 | 24.63 |
| Solyc05g056360.1.1 | Tomato | cytosol | 25.39 | 24.55 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 20.69 | 24.26 |
| PGSC0003DMT400091031 | Potato | cytosol | 18.5 | 23.79 |
| Solyc01g110220.1.1 | Tomato | cytosol | 18.18 | 23.77 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 18.18 | 23.39 |
| AT5G07930.3 | Thale cress | nucleus | 21.32 | 23.13 |
| KRH29371 | Soybean | nucleus | 26.65 | 23.1 |
| Solyc01g110210.1.1 | Tomato | nucleus | 17.24 | 21.4 |
| PGSC0003DMT400060283 | Potato | cytosol | 20.06 | 21.26 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 18.5 | 19.47 |
| TraesCS3D01G407900.1 | Wheat | nucleus | 28.53 | 13.32 |
| TraesCS7D01G003000.1 | Wheat | plastid | 17.55 | 6.44 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 17.87 | 6.07 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 16.3 | 5.63 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G364300.1 | EnsemblPlantsGene:TraesCS7D01G364300 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | PANTHER:PTHR45087 |
| PFAM:PF04059 | SEG:seg | SUPFAM:SSF54928 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:+:469524410..469525735
Molecular Weight (calculated)
35448.5 Da
IEP (calculated)
9.441
GRAVY (calculated)
-0.453
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASAVSRLN PIASPYLPMT LAPTWCYPSP FSYLPPPAPL PPAHGWPFAY GGDWCHTVGM PSFPLQTAYG HPAPLMVYCC TAPPPPPQSA TRCRITEIIE
101: DGGEVASKEE VRDEPSPRSV LTPWSRDPPT SPLPPRAPLL RPPPRTSSAG KPRRRQWPRL AFNPKENNTS LMIRNIPNKF MKRRFMAILD QHCAEENAKL
201: GGDGEGVRSE YDFLYVPVDF GTRFNKGYAF VNMTTAAAAR RLHAHLNGHR WEAAGSKKVC DVVHARLEGL DGLVAHFSAS WFPCGGRKDF LPVRFEPPRD
301: GVRWTAEHVV GHLQPRRSC
101: DGGEVASKEE VRDEPSPRSV LTPWSRDPPT SPLPPRAPLL RPPPRTSSAG KPRRRQWPRL AFNPKENNTS LMIRNIPNKF MKRRFMAILD QHCAEENAKL
201: GGDGEGVRSE YDFLYVPVDF GTRFNKGYAF VNMTTAAAAR RLHAHLNGHR WEAAGSKKVC DVVHARLEGL DGLVAHFSAS WFPCGGRKDF LPVRFEPPRD
301: GVRWTAEHVV GHLQPRRSC
001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
Arabidopsis Description
TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.