Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40768 | Canola | nucleus | 95.0 | 88.08 |
| AT5G07930.3 | Thale cress | nucleus | 59.29 | 56.46 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 23.21 | 46.43 |
| PGSC0003DMT400008115 | Potato | cytosol | 20.36 | 39.58 |
| GSMUA_Achr11P... | Banana | cytosol | 22.14 | 38.75 |
| Solyc01g110260.1.1 | Tomato | cytosol | 23.57 | 35.48 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 21.07 | 34.5 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 20.71 | 32.95 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 22.14 | 31.0 |
| Solyc01g110200.1.1 | Tomato | plastid | 29.29 | 29.6 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 25.36 | 28.63 |
| Solyc01g110230.1.1 | Tomato | cytosol | 25.71 | 28.35 |
| PGSC0003DMT400091031 | Potato | cytosol | 25.0 | 28.23 |
| PGSC0003DMT400085334 | Potato | peroxisome | 26.43 | 27.61 |
| PGSC0003DMT400090567 | Potato | plastid | 29.29 | 27.42 |
| Solyc01g110210.1.1 | Tomato | nucleus | 24.29 | 26.46 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 22.14 | 25.94 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 22.86 | 25.5 |
| KRH24390 | Soybean | nucleus | 32.14 | 25.5 |
| KRH29371 | Soybean | nucleus | 32.86 | 25.0 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 27.86 | 24.76 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 27.86 | 24.45 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 25.71 | 24.32 |
| Solyc01g110220.1.1 | Tomato | cytosol | 20.0 | 22.95 |
| Os09t0531200-01 | Rice | cytosol | 25.36 | 21.98 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 25.71 | 21.62 |
| Zm00001d053860_P001 | Maize | plastid | 26.79 | 21.49 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 25.36 | 20.64 |
| Zm00001d006207_P001 | Maize | plastid | 24.29 | 20.36 |
| EES04542 | Sorghum | plastid | 25.0 | 20.17 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 25.71 | 18.51 |
| OQU89813 | Sorghum | nucleus, plastid | 23.93 | 18.21 |
| TraesCS5B01G319500.1 | Wheat | plastid | 25.36 | 18.07 |
| TraesCS6B01G159300.2 | Wheat | plastid | 25.0 | 17.07 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.29 | 16.0 |
| Bra004255.1-P | Field mustard | plastid | 28.57 | 14.55 |
| Bra025185.1-P | Field mustard | nucleus | 27.5 | 12.66 |
| Bra036347.1-P | Field mustard | plastid | 22.5 | 11.58 |
| Bra013285.1-P | Field mustard | nucleus | 21.79 | 9.19 |
| Bra030135.1-P | Field mustard | nucleus | 22.5 | 8.56 |
| Bra032316.1-P | Field mustard | nucleus | 23.21 | 8.21 |
| Bra009274.1-P | Field mustard | nucleus | 22.5 | 7.12 |
| Bra010044.1-P | Field mustard | nucleus | 22.86 | 6.99 |
| Bra029297.1-P | Field mustard | nucleus | 22.14 | 6.95 |
| Bra004728.1-P | Field mustard | nucleus | 17.86 | 6.78 |
| Bra000279.1-P | Field mustard | nucleus | 18.57 | 6.61 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra028677 | EnsemblPlants:Bra028677.1 | EnsemblPlants:Bra028677.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 |
| UniProt:M4EIR2 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF04059 | PFscan:PS50102 |
| PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 | UniParc:UPI000254325F | SEG:seg |
Description
AT5G07930 (E=1e-078) MCT2 | MCT2 (mei2 C-Terminal RRM only like 2); nucleic acid binding
Coordinates
chrA02:+:2597277..2598650
Molecular Weight (calculated)
32118.1 Da
IEP (calculated)
7.912
GRAVY (calculated)
-0.497
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPASSQGS SMAMTNGDVS RTLNPAAPLF FPQNPYLHHY YFSSPQILFI SDTNFPPSSS IVVYYPLWYI NLNPTWFEAT QELPPLHSQD PIQELTPPPT
101: SRKKVFGWER SSRHDRNKLV WRRKIHYQAE SNGDTTVMLR NIPNKYTREM LIQFLDEHCE EENNKEEDEE NAYDFLYLPI DFQSQMNKGY AFVNFTKAEA
201: VSKFKAACNN KPWCCFGSRK ILEIAHARIQ GKDKLVKHFE QMIYPAEAYS AVTFIPARRG PKSTGLTIVI GKCTEAAISV
101: SRKKVFGWER SSRHDRNKLV WRRKIHYQAE SNGDTTVMLR NIPNKYTREM LIQFLDEHCE EENNKEEDEE NAYDFLYLPI DFQSQMNKGY AFVNFTKAEA
201: VSKFKAACNN KPWCCFGSRK ILEIAHARIQ GKDKLVKHFE QMIYPAEAYS AVTFIPARRG PKSTGLTIVI GKCTEAAISV
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.