Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 38.29 | 89.2 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 35.85 | 85.96 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 42.44 | 44.73 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 13.41 | 39.29 |
| PGSC0003DMT400008115 | Potato | cytosol | 12.68 | 36.11 |
| AT1G37140.1 | Thale cress | plastid | 17.56 | 30.9 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 22.2 | 30.74 |
| Solyc01g110260.1.1 | Tomato | cytosol | 13.9 | 30.65 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 23.17 | 30.16 |
| Zm00001d053860_P001 | Maize | plastid | 25.12 | 29.51 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 17.07 | 29.29 |
| CDY44647 | Canola | nucleus, plastid | 16.83 | 28.87 |
| CDY62093 | Canola | nucleus, plastid | 17.32 | 28.4 |
| EES04542 | Sorghum | plastid | 23.9 | 28.24 |
| TraesCS5B01G319500.1 | Wheat | plastid | 26.83 | 27.99 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 12.93 | 26.5 |
| Solyc01g110210.1.1 | Tomato | nucleus | 16.34 | 26.07 |
| PGSC0003DMT400091031 | Potato | cytosol | 15.61 | 25.81 |
| Solyc01g110200.1.1 | Tomato | plastid | 17.07 | 25.27 |
| Solyc01g110230.1.1 | Tomato | cytosol | 15.61 | 25.2 |
| Solyc05g056360.1.1 | Tomato | cytosol | 20.24 | 25.15 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 15.12 | 25.0 |
| CDY14020 | Canola | plastid | 17.07 | 25.0 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 17.07 | 25.0 |
| KRH18810 | Soybean | cytosol | 16.34 | 24.91 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 16.1 | 24.26 |
| PGSC0003DMT400085334 | Potato | peroxisome | 15.61 | 23.88 |
| PGSC0003DMT400090567 | Potato | plastid | 17.32 | 23.75 |
| CDY40768 | Canola | nucleus | 17.07 | 23.18 |
| Solyc01g110220.1.1 | Tomato | cytosol | 13.66 | 22.95 |
| KRH29371 | Soybean | nucleus | 20.24 | 22.55 |
| AT5G07930.3 | Thale cress | nucleus | 15.85 | 22.11 |
| KRH24390 | Soybean | nucleus | 18.78 | 21.81 |
| PGSC0003DMT400060283 | Potato | cytosol | 15.61 | 21.26 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 14.63 | 19.8 |
| TraesCS3B01G447800.1 | Wheat | nucleus | 23.17 | 14.05 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 15.85 | 6.94 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 15.61 | 6.93 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G159300.2 | EnsemblPlantsGene:TraesCS6B01G159300 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | PANTHER:PTHR45087 |
| PFAM:PF04059 | SEG:seg | SUPFAM:SSF54928 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:162270046..162272005
Molecular Weight (calculated)
45236.3 Da
IEP (calculated)
11.891
GRAVY (calculated)
-0.685
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISGCPRPI PTTLLQRSQI VPPARERFPA GERVSSNSPS PSPPTRPPKA MAATGLNAYA RPYSRRSARA HHAPPKPHPF MTPEYHGDAG YPPPFPLAAN
101: YSRATFPEHH YPGPLPPRPF FPEHVAAPRH HGRPRGPVFD PEKLYAQVMH SFNYKHTARA AAAGKGKGGG PATRRLLPAA PPCGPRGQRA RGRSKVYVPA
201: ARGGGRERSP SPALTRRRAW PVPPPAWAWH GRSRTTVMIR NIPNKLTRPS MMKLLDDHCA RVNRRRGPGA VPAAYDFLYL PMDFSRQRCS NKGYAFVNFT
301: TAEAARGLHY ALHGRGWHRS LGSGKIINIG AAYMQGRHRL VRHFSRSTFA CHTDEYLPAL FSPPRDGAAD PPPAEPMHLG RRVPPRVSPA VQPAAPEQQL
401: VWVRRGEVTS
101: YSRATFPEHH YPGPLPPRPF FPEHVAAPRH HGRPRGPVFD PEKLYAQVMH SFNYKHTARA AAAGKGKGGG PATRRLLPAA PPCGPRGQRA RGRSKVYVPA
201: ARGGGRERSP SPALTRRRAW PVPPPAWAWH GRSRTTVMIR NIPNKLTRPS MMKLLDDHCA RVNRRRGPGA VPAAYDFLYL PMDFSRQRCS NKGYAFVNFT
301: TAEAARGLHY ALHGRGWHRS LGSGKIINIG AAYMQGRHRL VRHFSRSTFA CHTDEYLPAL FSPPRDGAAD PPPAEPMHLG RRVPPRVSPA VQPAAPEQQL
401: VWVRRGEVTS
001: MSVTGPFSHP TNLNPTAPAF FPAINQHQNQ NPSLIPTRFF LPHPPPPPPP PPPPLYFSYF SLPPPPPPPH LPPTSVTPTR AVMLLQVPAT VTETSLRRDM
101: ELFGEVRGVQ MERAHEGIVI FHFYNLINSQ RAFNEIRYRH MQQQEQQQHF HFTTARGLVS GHSLWAHFVF PQLNAVPEGN NQGSLVIMNL EPTVSSSTLR
201: HIFQVYGEVK QVRETPCKRE QRFVEFFDVR DAAKALRVMN GKVISGKPMV IQFSRPGGLT KKLFFASHFH KNFIFNNEHH YYPPPPPPSR MVKSDILMYK
301: QQQKKKKKKY VKKNLGDPYF MINENAITGG EFRDGRTTVM IKNIPNKYTQ KLLLKMLDTH CKDCNQSVIK EGNKTPMSSY DFVYLPIDFS NKSNVGYGFV
401: NMTSPEAVWR LYKSFHNQHW RDFTTTRKIC EVTYARIQGL ESLREHFKNV RLAGVEIDEY MPVVFSPPRD GRLSPEPVAI VDPWDKPVDD EDRCCKSRDG
501: FVVSDKKMVG SDGCGFCLSE RIENGGV
101: ELFGEVRGVQ MERAHEGIVI FHFYNLINSQ RAFNEIRYRH MQQQEQQQHF HFTTARGLVS GHSLWAHFVF PQLNAVPEGN NQGSLVIMNL EPTVSSSTLR
201: HIFQVYGEVK QVRETPCKRE QRFVEFFDVR DAAKALRVMN GKVISGKPMV IQFSRPGGLT KKLFFASHFH KNFIFNNEHH YYPPPPPPSR MVKSDILMYK
301: QQQKKKKKKY VKKNLGDPYF MINENAITGG EFRDGRTTVM IKNIPNKYTQ KLLLKMLDTH CKDCNQSVIK EGNKTPMSSY DFVYLPIDFS NKSNVGYGFV
401: NMTSPEAVWR LYKSFHNQHW RDFTTTRKIC EVTYARIQGL ESLREHFKNV RLAGVEIDEY MPVVFSPPRD GRLSPEPVAI VDPWDKPVDD EDRCCKSRDG
501: FVVSDKKMVG SDGCGFCLSE RIENGGV
Arabidopsis Description
TEL2F12A21.10 [Source:UniProtKB/TrEMBL;Acc:Q9FXE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.