Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40768 | Canola | nucleus | 89.64 | 83.11 |
| AT5G07930.3 | Thale cress | nucleus | 58.21 | 55.44 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 23.21 | 46.43 |
| PGSC0003DMT400008115 | Potato | cytosol | 20.71 | 40.28 |
| GSMUA_Achr11P... | Banana | cytosol | 21.43 | 37.5 |
| Solyc01g110260.1.1 | Tomato | cytosol | 24.29 | 36.56 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 21.07 | 34.5 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 20.71 | 32.95 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 23.21 | 32.5 |
| Solyc01g110200.1.1 | Tomato | plastid | 30.0 | 30.32 |
| Solyc01g110230.1.1 | Tomato | cytosol | 26.43 | 29.13 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 25.71 | 29.03 |
| PGSC0003DMT400091031 | Potato | cytosol | 25.0 | 28.23 |
| PGSC0003DMT400090567 | Potato | plastid | 30.0 | 28.09 |
| PGSC0003DMT400085334 | Potato | peroxisome | 26.79 | 27.99 |
| Solyc01g110210.1.1 | Tomato | nucleus | 25.0 | 27.24 |
| KRH29371 | Soybean | nucleus | 34.29 | 26.09 |
| KRH24390 | Soybean | nucleus | 32.86 | 26.06 |
| CDY44647 | Canola | nucleus, plastid | 22.14 | 25.94 |
| CDY62093 | Canola | nucleus, plastid | 22.14 | 24.8 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 26.07 | 24.66 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 21.79 | 24.3 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 27.14 | 24.13 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 27.14 | 23.82 |
| Solyc01g110220.1.1 | Tomato | cytosol | 20.36 | 23.36 |
| Os09t0531200-01 | Rice | cytosol | 25.71 | 22.29 |
| Zm00001d053860_P001 | Maize | plastid | 27.14 | 21.78 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 25.0 | 21.02 |
| Zm00001d006207_P001 | Maize | plastid | 24.64 | 20.66 |
| EES04542 | Sorghum | plastid | 25.0 | 20.17 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 24.64 | 20.06 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 26.43 | 19.02 |
| OQU89813 | Sorghum | nucleus, plastid | 23.93 | 18.21 |
| TraesCS5B01G319500.1 | Wheat | plastid | 24.64 | 17.56 |
| TraesCS6B01G159300.2 | Wheat | plastid | 25.0 | 17.07 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.29 | 16.0 |
| CDY01848 | Canola | plastid | 28.21 | 15.74 |
| CDY56219 | Canola | plastid | 28.57 | 15.21 |
| CDX83589 | Canola | nucleus | 28.21 | 13.6 |
| CDY13612 | Canola | nucleus | 28.21 | 12.99 |
| CDX99727 | Canola | nucleus | 27.14 | 12.6 |
| CDY40990 | Canola | nucleus | 27.5 | 12.58 |
| CDY30686 | Canola | nucleus | 20.71 | 10.94 |
| CDY61671 | Canola | nucleus | 22.14 | 9.34 |
| CDX78826 | Canola | nucleus | 21.79 | 9.17 |
| CDY15631 | Canola | nucleus | 22.5 | 8.56 |
| CDX94663 | Canola | nucleus | 22.5 | 8.55 |
| CDY48336 | Canola | nucleus | 23.21 | 8.41 |
| CDX99820 | Canola | nucleus | 23.21 | 8.21 |
| CDX98985 | Canola | nucleus | 23.21 | 7.34 |
| CDX70025 | Canola | nucleus | 23.21 | 7.32 |
| CDY30687 | Canola | nucleus | 22.14 | 7.25 |
| CDX83512 | Canola | nucleus | 18.93 | 6.73 |
| CDX79841 | Canola | nucleus | 18.57 | 6.71 |
| CDY42812 | Canola | nucleus | 18.93 | 6.68 |
| CDY42813 | Canola | nucleus | 18.93 | 6.49 |
| CDY00238 | Canola | nucleus | 20.71 | 6.35 |
| CDY60197 | Canola | endoplasmic reticulum, plasma membrane | 17.86 | 6.19 |
| CDX86947 | Canola | nucleus | 20.0 | 6.16 |
| CDY72437 | Canola | nucleus | 2.5 | 2.79 |
| CDY71762 | Canola | nucleus | 1.79 | 2.08 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078FHX6 | UniProt:A0A078FHX6 | EnsemblPlants:CDY14020 | ProteinID:CDY14020 |
| ProteinID:CDY14020.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00078544001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 | UniParc:UPI0004EDB8AA |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g01370DBnaC02g01370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHX6]
Coordinates
chrLK032040:-:20360..21741
Molecular Weight (calculated)
31965.0 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.503
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPTSSQGS SMAMINGDVS RTLNPAAPLF FPQNPYLHHY YFSSPQILFI SDTNLPPPSS IVVHYPLWYN NPNPTWFEAT QELPPLHSQD PIQELSPPPT
101: SRKRVFGWGR SSRHHRNKLV WRRRIHYQAE SNGDTTVMLR NIPNKYTREM LIEFLDEHCG AENNKEEDEE NAYDFLYLPI DFQSKMNKGY AFVNFTKAEA
201: VSKFKAACNN KPWYCFGSRK ILEIALARIQ GKDNLVKHFE QMIYPAEAYS AVSFIPARKG PKSTGLTIMV GKCTQAAISV
101: SRKRVFGWGR SSRHHRNKLV WRRRIHYQAE SNGDTTVMLR NIPNKYTREM LIEFLDEHCG AENNKEEDEE NAYDFLYLPI DFQSKMNKGY AFVNFTKAEA
201: VSKFKAACNN KPWYCFGSRK ILEIALARIQ GKDNLVKHFE QMIYPAEAYS AVSFIPARKG PKSTGLTIMV GKCTQAAISV
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.