Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 50.0 | 67.0 |
| Solyc01g110230.1.1 | Tomato | cytosol | 61.19 | 64.57 |
| PGSC0003DMT400008115 | Potato | cytosol | 33.96 | 63.19 |
| PGSC0003DMT400091031 | Potato | cytosol | 50.37 | 54.44 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 47.01 | 50.81 |
| PGSC0003DMT400090567 | Potato | plastid | 51.12 | 45.82 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 20.52 | 39.29 |
| GSMUA_Achr11P... | Banana | cytosol | 20.52 | 34.38 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 19.4 | 30.41 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 18.28 | 27.84 |
| CDY14020 | Canola | plastid | 27.99 | 26.79 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 27.61 | 26.43 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 24.25 | 25.9 |
| CDY40768 | Canola | nucleus | 27.61 | 24.5 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 26.87 | 24.32 |
| AT5G07930.3 | Thale cress | nucleus | 25.0 | 22.79 |
| KRH29371 | Soybean | nucleus | 29.85 | 21.74 |
| KRH24390 | Soybean | nucleus | 28.36 | 21.53 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 24.63 | 20.95 |
| Os09t0531200-01 | Rice | cytosol | 25.0 | 20.74 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 25.75 | 20.72 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 24.63 | 20.69 |
| Zm00001d006207_P001 | Maize | plastid | 25.37 | 20.36 |
| Zm00001d053860_P001 | Maize | plastid | 25.37 | 19.48 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 25.0 | 19.48 |
| EES04542 | Sorghum | plastid | 23.88 | 18.44 |
| PGSC0003DMT400060283 | Potato | cytosol | 20.52 | 18.27 |
| OQU89813 | Sorghum | nucleus, plastid | 25.0 | 18.21 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 16.42 | 17.6 |
| TraesCS5B01G319500.1 | Wheat | plastid | 25.75 | 17.56 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 25.37 | 17.48 |
| TraesCS6B01G159300.2 | Wheat | plastid | 23.88 | 15.61 |
| PGSC0003DMT400027957 | Potato | nucleus | 14.93 | 8.26 |
| PGSC0003DMT400054712 | Potato | nucleus | 23.13 | 7.3 |
| PGSC0003DMT400044564 | Potato | nucleus | 22.01 | 6.94 |
| PGSC0003DMT400007982 | Potato | nucleus | 21.27 | 6.7 |
| PGSC0003DMT400005752 | Potato | nucleus | 19.4 | 5.33 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400085334 | EnsemblPlantsGene:PGSC0003DMG400034905 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | PANTHER:PTHR45087 | PFAM:PF04059 |
| PGSC:PGSC0003DMG400034905 | SEG:seg | UniParc:UPI000295ABEA | UniProt:M1D9A2 | MapMan:35.1 | : |
Description
Protein terminal ear1 homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400034905]
Coordinates
chr1:+:86559648..86560761
Molecular Weight (calculated)
30631.0 Da
IEP (calculated)
10.136
GRAVY (calculated)
-0.547
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDVPKSSLN PHAPEYIPIT NPPPPLPTVD SPPQENVGRG RQRRNIHPTY VLLRRHQSLP VMLPTRPISP ALPPLLPLPT VDSPPQENVG RGRQRRSIPP
101: KLGGLEKLKE TTAMIKNIPF HYNREKLMQF LDDYCLLENQ KARDSNEENI HVFAYDFLYL PMNFKMTSSA GYGFVNFTDH RTLSNFFGHF SERAKAYPNS
201: ARSVQMVIAK IQGKNALVNR YKNTRFVCES EECLPVRFNP QRNGSRESVQ VITVGKFEVI PDIPINRF
101: KLGGLEKLKE TTAMIKNIPF HYNREKLMQF LDDYCLLENQ KARDSNEENI HVFAYDFLYL PMNFKMTSSA GYGFVNFTDH RTLSNFFGHF SERAKAYPNS
201: ARSVQMVIAK IQGKNALVNR YKNTRFVCES EECLPVRFNP QRNGSRESVQ VITVGKFEVI PDIPINRF
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.