Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008115 | Potato | cytosol | 50.0 | 48.61 |
| GSMUA_Achr11P... | Banana | cytosol | 44.29 | 38.75 |
| Solyc01g110260.1.1 | Tomato | cytosol | 51.43 | 38.71 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 39.29 | 32.16 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 39.29 | 31.25 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 37.14 | 26.0 |
| Solyc01g110200.1.1 | Tomato | plastid | 49.29 | 24.91 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 46.43 | 23.21 |
| CDY14020 | Canola | plastid | 46.43 | 23.21 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 40.71 | 22.71 |
| PGSC0003DMT400090567 | Potato | plastid | 47.14 | 22.07 |
| CDY40768 | Canola | nucleus | 47.14 | 21.85 |
| VIT_00s0239g00110.t01 | Wine grape | plastid | 17.14 | 21.82 |
| AT5G07930.3 | Thale cress | nucleus | 43.57 | 20.75 |
| PGSC0003DMT400085334 | Potato | peroxisome | 39.29 | 20.52 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 42.86 | 20.27 |
| Solyc01g110230.1.1 | Tomato | cytosol | 35.0 | 19.29 |
| KRH24390 | Soybean | nucleus | 47.14 | 18.7 |
| KRH29371 | Soybean | nucleus | 48.57 | 18.48 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 39.29 | 17.46 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 30.71 | 17.34 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 39.29 | 17.24 |
| PGSC0003DMT400091031 | Potato | cytosol | 30.0 | 16.94 |
| Os09t0531200-01 | Rice | cytosol | 38.57 | 16.72 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 39.29 | 16.52 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 39.29 | 15.99 |
| Solyc01g110210.1.1 | Tomato | nucleus | 29.29 | 15.95 |
| Zm00001d006207_P001 | Maize | plastid | 37.86 | 15.87 |
| Solyc01g110220.1.1 | Tomato | cytosol | 26.43 | 15.16 |
| Zm00001d053860_P001 | Maize | plastid | 37.14 | 14.9 |
| OQU89813 | Sorghum | nucleus, plastid | 38.57 | 14.67 |
| EES04542 | Sorghum | plastid | 35.71 | 14.41 |
| TraesCS5B01G319500.1 | Wheat | plastid | 40.0 | 14.25 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 38.57 | 13.88 |
| TraesCS6B01G159300.2 | Wheat | plastid | 39.29 | 13.41 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 28.57 | 13.2 |
| VIT_14s0219g00270.t01 | Wine grape | plastid | 41.43 | 10.38 |
| VIT_01s0137g00320.t01 | Wine grape | nucleus | 40.0 | 8.51 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.29 | 8.0 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 32.14 | 5.31 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 32.14 | 5.09 |
| VIT_17s0000g00240.t01 | Wine grape | nucleus | 32.86 | 4.61 |
| VIT_01s0150g00090.t01 | Wine grape | nucleus | 31.43 | 4.44 |
Protein Annotations
| ArrayExpress:VIT_03s0038g00390 | EMBL:FN596508 | EnsemblPlants:VIT_03s0038g00390.t01 | EnsemblPlantsGene:VIT_03s0038g00390 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C |
| PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:CBI38012 | ProteinID:CBI38012.3 | UniParc:UPI00015C89A8 | UniProt:D7U5J3 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:373306..374140
Molecular Weight (calculated)
16395.5 Da
IEP (calculated)
6.236
GRAVY (calculated)
-0.419
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLQFLDEHC MKENQKLGLE NSEEADQEER IVSAFDFLYL PIDFDTGMNK SYAFVNFTHP KAVWRFHFAS HNQKWELFHS KKIREIVCAK IQGKEALVKH
101: FEKMSFACEW DEFLPLCFSP ARDGSRELVK QSTVGSRVDA
101: FEKMSFACEW DEFLPLCFSP ARDGSRELVK QSTVGSRVDA
001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
Arabidopsis Description
TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.