Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24390 | Soybean | nucleus | 77.99 | 81.3 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 18.48 | 48.57 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 18.21 | 39.18 |
| PGSC0003DMT400008115 | Potato | cytosol | 15.22 | 38.89 |
| GSMUA_Achr11P... | Banana | cytosol | 16.03 | 36.88 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 16.58 | 34.66 |
| CDY14020 | Canola | plastid | 26.09 | 34.29 |
| Solyc01g110260.1.1 | Tomato | cytosol | 17.12 | 33.87 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 25.0 | 32.86 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 17.66 | 32.5 |
| KRH31364 | Soybean | cytosol, nucleus | 15.22 | 32.37 |
| CDY40768 | Canola | nucleus | 25.0 | 30.46 |
| PGSC0003DMT400085334 | Potato | peroxisome | 21.74 | 29.85 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 19.84 | 29.44 |
| Solyc01g110200.1.1 | Tomato | plastid | 22.01 | 29.24 |
| PGSC0003DMT400091031 | Potato | cytosol | 19.57 | 29.03 |
| KRH18810 | Soybean | cytosol | 21.2 | 29.0 |
| Solyc01g110230.1.1 | Tomato | cytosol | 19.84 | 28.74 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 20.65 | 27.94 |
| AT5G07930.3 | Thale cress | nucleus | 22.28 | 27.89 |
| Os09t0531200-01 | Rice | cytosol | 24.18 | 27.55 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 18.75 | 27.49 |
| PGSC0003DMT400090567 | Potato | plastid | 22.28 | 27.42 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 22.01 | 27.36 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 23.37 | 27.3 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 23.1 | 26.65 |
| Solyc01g110210.1.1 | Tomato | nucleus | 18.48 | 26.46 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 22.28 | 24.62 |
| Solyc01g110220.1.1 | Tomato | cytosol | 16.3 | 24.59 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 22.01 | 23.55 |
| Zm00001d006207_P001 | Maize | plastid | 20.65 | 22.75 |
| Zm00001d053860_P001 | Maize | plastid | 21.2 | 22.35 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 23.37 | 22.11 |
| EES04542 | Sorghum | plastid | 19.84 | 21.04 |
| OQU89813 | Sorghum | nucleus, plastid | 20.92 | 20.92 |
| TraesCS5B01G319500.1 | Wheat | plastid | 22.01 | 20.61 |
| TraesCS6B01G159300.2 | Wheat | plastid | 22.55 | 20.24 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 13.32 | 19.6 |
| KRG97510 | Soybean | nucleus | 24.46 | 16.7 |
| KRH31365 | Soybean | nucleus | 11.68 | 13.23 |
| KRH37781 | Soybean | nucleus | 17.93 | 7.66 |
| KRH12823 | Soybean | nucleus | 17.93 | 7.66 |
| KRH46056 | Soybean | nucleus, plastid | 17.66 | 7.59 |
| KRG98918 | Soybean | plastid | 17.39 | 7.47 |
| KRH45198 | Soybean | nucleus | 14.4 | 7.18 |
| KRH59735 | Soybean | nucleus | 17.66 | 6.86 |
| KRH41056 | Soybean | nucleus | 17.39 | 6.71 |
| KRH54096 | Soybean | nucleus | 16.58 | 6.31 |
| KRH63864 | Soybean | nucleus | 16.58 | 6.28 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02006798 | EnsemblPlantsGene:GLYMA_11G112500 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7LP66 | EnsemblPlants:KRH29371 |
| ProteinID:KRH29371 | ProteinID:KRH29371.1 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 | UniParc:UPI00029492FA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:8579778..8581676
Molecular Weight (calculated)
42564.9 Da
IEP (calculated)
10.085
GRAVY (calculated)
-0.787
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSPLNPEAL EYLPRHNHKL QQQQQQVLQP QPLPCSTFPP TSIFTPHCNF LLLFSSFPSR HPYNPFYYPT LTLPPLPPSS IPLALEADQP TRFHEIKNGS
101: DSDSDSNPVE AHAVNKKKDQ MVIAEEPKTG CGSIGFVKKR AFKAYINGRC LESWRQKSYP PRRKVEENGQ RKSVDFLRNR KVFRHHPANE PFRGFPKRNR
201: FNPSLPVRDG ETTVMIRNIP SKYTRELLVK FLEDHCLKVN RTTENEACKE KGEEESIGLA FDFVYLPIDF KSRMNKGYAF VNFTKPQAAR KFRNTASRLK
301: WDMFQSNKIR EVVSARLQGK EQLEKHFETM NFPCDSEDVL PVSFSPPRDG VNKGDQRTMG NLMKRQHV
101: DSDSDSNPVE AHAVNKKKDQ MVIAEEPKTG CGSIGFVKKR AFKAYINGRC LESWRQKSYP PRRKVEENGQ RKSVDFLRNR KVFRHHPANE PFRGFPKRNR
201: FNPSLPVRDG ETTVMIRNIP SKYTRELLVK FLEDHCLKVN RTTENEACKE KGEEESIGLA FDFVYLPIDF KSRMNKGYAF VNFTKPQAAR KFRNTASRLK
301: WDMFQSNKIR EVVSARLQGK EQLEKHFETM NFPCDSEDVL PVSFSPPRDG VNKGDQRTMG NLMKRQHV
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.