Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028677.1-P | Field mustard | nucleus, plastid | 88.08 | 95.0 |
| CDY14020 | Canola | plastid | 83.11 | 89.64 |
| AT5G07930.3 | Thale cress | nucleus | 54.97 | 56.46 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 21.85 | 47.14 |
| PGSC0003DMT400008115 | Potato | cytosol | 19.21 | 40.28 |
| GSMUA_Achr11P... | Banana | cytosol | 20.2 | 38.12 |
| Solyc01g110260.1.1 | Tomato | cytosol | 22.52 | 36.56 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 19.54 | 34.5 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 19.21 | 32.95 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 20.2 | 30.5 |
| Solyc01g110200.1.1 | Tomato | plastid | 27.15 | 29.6 |
| Solyc01g110230.1.1 | Tomato | cytosol | 23.84 | 28.35 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 23.18 | 28.23 |
| PGSC0003DMT400091031 | Potato | cytosol | 22.85 | 27.82 |
| PGSC0003DMT400085334 | Potato | peroxisome | 24.5 | 27.61 |
| PGSC0003DMT400090567 | Potato | plastid | 27.15 | 27.42 |
| Solyc01g110210.1.1 | Tomato | nucleus | 22.52 | 26.46 |
| CDY44647 | Canola | nucleus, plastid | 20.53 | 25.94 |
| KRH24390 | Soybean | nucleus | 29.47 | 25.21 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 20.86 | 25.1 |
| KRH29371 | Soybean | nucleus | 30.46 | 25.0 |
| CDY62093 | Canola | nucleus, plastid | 20.53 | 24.8 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 24.17 | 24.66 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 25.5 | 24.44 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 25.5 | 24.14 |
| Solyc01g110220.1.1 | Tomato | cytosol | 18.21 | 22.54 |
| Os09t0531200-01 | Rice | cytosol | 23.51 | 21.98 |
| Zm00001d053860_P001 | Maize | plastid | 24.5 | 21.2 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 22.85 | 20.72 |
| Zm00001d006207_P001 | Maize | plastid | 22.19 | 20.06 |
| EES04542 | Sorghum | plastid | 22.85 | 19.88 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 22.52 | 19.77 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 24.17 | 18.77 |
| OQU89813 | Sorghum | nucleus, plastid | 22.19 | 18.21 |
| TraesCS5B01G319500.1 | Wheat | plastid | 22.52 | 17.3 |
| TraesCS6B01G159300.2 | Wheat | plastid | 23.18 | 17.07 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 12.91 | 15.6 |
| CDY01848 | Canola | plastid | 25.83 | 15.54 |
| CDY56219 | Canola | plastid | 26.16 | 15.02 |
| CDX83589 | Canola | nucleus | 25.5 | 13.25 |
| CDY13612 | Canola | nucleus | 25.5 | 12.66 |
| CDX99727 | Canola | nucleus | 24.5 | 12.27 |
| CDY40990 | Canola | nucleus | 24.83 | 12.25 |
| CDY30686 | Canola | nucleus | 18.87 | 10.75 |
| CDY61671 | Canola | nucleus | 19.87 | 9.04 |
| CDX78826 | Canola | nucleus | 19.54 | 8.87 |
| CDY15631 | Canola | nucleus | 20.2 | 8.29 |
| CDX94663 | Canola | nucleus | 20.2 | 8.28 |
| CDY48336 | Canola | nucleus | 20.86 | 8.15 |
| CDX99820 | Canola | nucleus | 20.86 | 7.95 |
| CDX70025 | Canola | nucleus | 21.52 | 7.32 |
| CDY30687 | Canola | nucleus | 20.2 | 7.13 |
| CDX98985 | Canola | nucleus | 20.86 | 7.12 |
| CDX79841 | Canola | nucleus | 17.22 | 6.71 |
| CDX83512 | Canola | nucleus | 17.22 | 6.61 |
| CDY42812 | Canola | nucleus | 17.22 | 6.56 |
| CDY00238 | Canola | nucleus | 19.54 | 6.46 |
| CDY42813 | Canola | nucleus | 17.22 | 6.36 |
| CDX86947 | Canola | nucleus | 18.87 | 6.27 |
| CDY60197 | Canola | endoplasmic reticulum, plasma membrane | 16.56 | 6.19 |
| CDY72437 | Canola | nucleus | 2.65 | 3.19 |
| CDY71762 | Canola | nucleus | 1.99 | 2.5 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078HVG3 | UniProt:A0A078HVG3 | EnsemblPlants:CDY40768 | ProteinID:CDY40768 |
| ProteinID:CDY40768.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00071668001 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 |
| UniParc:UPI0004EDD2B9 | SEG:seg | : | : | : | : |
Description
BnaAnng06310DBnaAnng06310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVG3]
Coordinates
chrLK032478:-:171478..175503
Molecular Weight (calculated)
34993.8 Da
IEP (calculated)
7.260
GRAVY (calculated)
-0.449
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFDCEIIRL CLLESLDSLA CNHQKHIENI RTSMAMTNGD VSRTLNPAAP LFFPQNPYLH HYYFSSPQIL FISDTNLPPL SSIIVYYPLW YNNLNPTWFE
101: ATQELPPLHS QDPIQELTPP PTSRKKVFGW ERSSRHDRNK LVWRRKIHYQ AESNGDTTVM LRNIPNKYTR EMLIQFLDEH CEEENNKEED EENAYDFLYL
201: PIDFQSQMNK GYAFVNFTKA EAVSKFKAAC NNKPWCCFGS RKILEIAHAR IQGKDKLVKH FEQMIYPAEA YSAVTFIPAR RGPKSTGLTI MVGKCTEAAI
301: SV
101: ATQELPPLHS QDPIQELTPP PTSRKKVFGW ERSSRHDRNK LVWRRKIHYQ AESNGDTTVM LRNIPNKYTR EMLIQFLDEH CEEENNKEED EENAYDFLYL
201: PIDFQSQMNK GYAFVNFTKA EAVSKFKAAC NNKPWCCFGS RKILEIAHAR IQGKDKLVKH FEQMIYPAEA YSAVTFIPAR RGPKSTGLTI MVGKCTEAAI
301: SV
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.