Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009274.1-P | Field mustard | nucleus | 99.66 | 100.0 |
| CDX98985 | Canola | nucleus | 94.26 | 94.58 |
| AT5G07290.1 | Thale cress | nucleus | 82.66 | 80.93 |
| CDY30686 | Canola | nucleus | 44.71 | 74.91 |
| CDY30687 | Canola | nucleus | 67.91 | 70.53 |
| CDY00238 | Canola | nucleus | 71.06 | 69.04 |
| CDX86947 | Canola | nucleus | 69.93 | 68.32 |
| CDY71762 | Canola | nucleus | 14.64 | 54.17 |
| VIT_00s0239g00110.t01 | Wine grape | plastid | 6.64 | 53.64 |
| CDY72437 | Canola | nucleus | 14.75 | 52.19 |
| KRH59735 | Soybean | nucleus | 47.18 | 44.2 |
| KRH41056 | Soybean | nucleus | 47.41 | 44.13 |
| KRH63864 | Soybean | nucleus | 46.96 | 42.95 |
| KRH54096 | Soybean | nucleus | 46.17 | 42.4 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 25.9 | 38.79 |
| CDY15631 | Canola | nucleus | 31.76 | 38.32 |
| CDX78826 | Canola | nucleus | 28.6 | 38.2 |
| CDX94663 | Canola | nucleus | 31.31 | 37.72 |
| CDY61671 | Canola | nucleus | 28.04 | 37.5 |
| CDY48336 | Canola | nucleus | 31.98 | 36.74 |
| CDX99820 | Canola | nucleus | 32.66 | 36.62 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 36.71 | 34.83 |
| Zm00001d035763_P003 | Maize | plastid | 37.16 | 34.81 |
| Os05t0102800-01 | Rice | nucleus | 37.05 | 34.45 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 36.04 | 34.08 |
| CDX83512 | Canola | nucleus | 29.17 | 32.91 |
| OQU77194 | Sorghum | plastid | 30.29 | 32.89 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 35.7 | 32.71 |
| CDY42812 | Canola | nucleus | 29.05 | 32.53 |
| CDX79841 | Canola | nucleus | 27.36 | 31.35 |
| CDY42813 | Canola | nucleus | 28.83 | 31.33 |
| CDY60197 | Canola | endoplasmic reticulum, plasma membrane | 28.15 | 30.94 |
| CDY01848 | Canola | plastid | 13.96 | 24.7 |
| CDY14020 | Canola | plastid | 7.32 | 23.21 |
| CDY56219 | Canola | plastid | 13.4 | 22.62 |
| CDY40768 | Canola | nucleus | 7.32 | 21.52 |
| CDX83589 | Canola | nucleus | 14.08 | 21.51 |
| CDY40990 | Canola | nucleus | 14.53 | 21.08 |
| CDY13612 | Canola | nucleus | 14.41 | 21.05 |
| CDX99727 | Canola | nucleus | 14.19 | 20.9 |
| CDY44647 | Canola | nucleus, plastid | 5.18 | 19.25 |
| CDY62093 | Canola | nucleus, plastid | 5.41 | 19.2 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078BZ84 | EnsemblPlants:CDX70025 | ProteinID:CDX70025 | ProteinID:CDX70025.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00136123001 | InterPro:IPR000504 | InterPro:IPR012677 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0004EEA1F8 | SEG:seg | : | : | : |
Description
BnaA10g23740D
Coordinates
chrLK031790:+:2767039..2772115
Molecular Weight (calculated)
97527.8 Da
IEP (calculated)
7.015
GRAVY (calculated)
-0.590
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDISEPRA GGTDLRTTPP QQKLYGFMKT NPVPEGGGDR SSNRPQQSSF SAALPSAIPN GRTSAASDSH WESSLFSSSF SEIFSRKLRL PRSDNLSFMP
101: AYPEEEPSQS LQEMEAQTIG NLLPDEDDFF AGVVGHKSRA NGGDDLDDCD LFSSVGGMEL EGDVFSSVSQ RAGKRGGSNV FGVGEPPRGE VSSRVLFVTN
201: MDSIIEDYEL RALFEQYGDV RALHTAGKNR GFILVSYYDI RAAQNAMRAL HGRLLRGRKL DVHYHIPKEN SGKENASEGA LLVNNLDSSV SSEEFYRIVS
301: SYGEIREVRR MMPENSQIYI EFFDVRTAEA ALRGLNGLEI AGRQLKLAPY FPEGTSFTSQ FAADDVEGGL PKMAFNNLSS AQIGRHYPGI LASTSTNGGS
401: MRMMHHSVGS PVNSFSERHQ SRDIPIGMPT STRIISASKP VGLQESGNPF DSSNTGIQSM PNLHPHSLHE YLDNFASGSP YKSSTAFSEM VSDGQKANEG
501: FMMSNVRGVG VDGFNGGVIG SPANGGSHRA NPNLWSSSNP SNGMMWPNSP SRVNGITSQR IPPVTGFSRA SPLMVNMASS PVHHHIGSAP VFNSPFWDRR
601: QTYVAEPPES SGFHFGSHGS MGYPGSSSSH AMEMASHKVF SHAGGNRMDA NSSNAVSRSS RQMPHFLSGR NPMLSVPGSF DLPNERYRNL SQRRSEFSSS
701: NAEKKLFELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLTEPENIVP FYKAFNGKKW EKFNSEKVAY
801: LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTDGPNA GDQEPFPMGT NIRSRPGKHR TSSIENYNNN FSSSSENREE PPNGTDSF
101: AYPEEEPSQS LQEMEAQTIG NLLPDEDDFF AGVVGHKSRA NGGDDLDDCD LFSSVGGMEL EGDVFSSVSQ RAGKRGGSNV FGVGEPPRGE VSSRVLFVTN
201: MDSIIEDYEL RALFEQYGDV RALHTAGKNR GFILVSYYDI RAAQNAMRAL HGRLLRGRKL DVHYHIPKEN SGKENASEGA LLVNNLDSSV SSEEFYRIVS
301: SYGEIREVRR MMPENSQIYI EFFDVRTAEA ALRGLNGLEI AGRQLKLAPY FPEGTSFTSQ FAADDVEGGL PKMAFNNLSS AQIGRHYPGI LASTSTNGGS
401: MRMMHHSVGS PVNSFSERHQ SRDIPIGMPT STRIISASKP VGLQESGNPF DSSNTGIQSM PNLHPHSLHE YLDNFASGSP YKSSTAFSEM VSDGQKANEG
501: FMMSNVRGVG VDGFNGGVIG SPANGGSHRA NPNLWSSSNP SNGMMWPNSP SRVNGITSQR IPPVTGFSRA SPLMVNMASS PVHHHIGSAP VFNSPFWDRR
601: QTYVAEPPES SGFHFGSHGS MGYPGSSSSH AMEMASHKVF SHAGGNRMDA NSSNAVSRSS RQMPHFLSGR NPMLSVPGSF DLPNERYRNL SQRRSEFSSS
701: NAEKKLFELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLTEPENIVP FYKAFNGKKW EKFNSEKVAY
801: LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTDGPNA GDQEPFPMGT NIRSRPGKHR TSSIENYNNN FSSSSENREE PPNGTDSF
001: MPSDILEPRG VPTPSHFHED IRITPEKQFG FMKNNPMPEG GVDRSSNLPT SSWTSDSYQL SQQSSLSGAL PSFIPNGRTT TNDTHWESSL FSSSLSDLFS
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
Arabidopsis Description
ML4Protein MEI2-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.