Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70025 | Canola | nucleus | 100.0 | 99.66 |
| AT5G07290.1 | Thale cress | nucleus | 82.71 | 80.71 |
| Bra010044.1-P | Field mustard | nucleus | 72.2 | 69.76 |
| Bra029297.1-P | Field mustard | nucleus | 69.15 | 68.61 |
| VIT_00s0239g00110.t01 | Wine grape | plastid | 6.67 | 53.64 |
| KRH59735 | Soybean | nucleus | 47.34 | 44.2 |
| KRH41056 | Soybean | nucleus | 47.57 | 44.13 |
| KRH63864 | Soybean | nucleus | 47.12 | 42.95 |
| KRH54096 | Soybean | nucleus | 46.33 | 42.4 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 25.99 | 38.79 |
| Bra013285.1-P | Field mustard | nucleus | 28.81 | 38.4 |
| Bra030135.1-P | Field mustard | nucleus | 31.86 | 38.32 |
| Bra032316.1-P | Field mustard | nucleus | 32.54 | 36.36 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 36.84 | 34.83 |
| Zm00001d035763_P003 | Maize | plastid | 37.29 | 34.81 |
| Os05t0102800-01 | Rice | nucleus | 37.18 | 34.45 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 36.16 | 34.08 |
| Bra004728.1-P | Field mustard | nucleus | 27.57 | 33.11 |
| Bra000279.1-P | Field mustard | nucleus | 29.27 | 32.91 |
| OQU77194 | Sorghum | plastid | 30.4 | 32.89 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 35.82 | 32.71 |
| Bra004255.1-P | Field mustard | plastid | 14.12 | 22.73 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 7.12 | 22.5 |
| Bra036347.1-P | Field mustard | plastid | 13.67 | 22.24 |
| Bra025185.1-P | Field mustard | nucleus | 14.35 | 20.89 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 5.31 | 19.67 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra009274 | EnsemblPlants:Bra009274.1 | EnsemblPlants:Bra009274.1-P | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0040007 | GO:GO:0045836 | GO:GO:0045927 |
| InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4CYH7 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF6 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002543797 | SEG:seg |
Description
AT5G07290 (E=0.0) AML4 | AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA binding / nucleic acid binding / nucleotide binding
Coordinates
chrA10:-:15921684..15925845
Molecular Weight (calculated)
97187.3 Da
IEP (calculated)
7.015
GRAVY (calculated)
-0.598
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDISEPRA GGTDLRTTPP QKLYGFMKTN PVPEGGGDRS SNRPQQSSFS AALPSAIPNG RTSAASDSHW ESSLFSSSFS EIFSRKLRLP RSDNLSFMPA
101: YPEEEPSQSL QEMEAQTIGN LLPDEDDFFA GVVGHKSRAN GGDDLDDCDL FSSVGGMELE GDVFSSVSQR AGKRGGSNVF GVGEPPRGEV SSRVLFVTNM
201: DSIIEDYELR ALFEQYGDVR ALHTAGKNRG FILVSYYDIR AAQNAMRALH GRLLRGRKLD VHYHIPKENS GKENASEGAL LVNNLDSSVS SEEFYRIVSS
301: YGEIREVRRM MPENSQIYIE FFDVRTAEAA LRGLNGLEIA GRQLKLAPYF PEGTSFTSQF AADDVEGGLP KMAFNNLSSA QIGRHYPGIL ASTSTNGGSM
401: RMMHHSVGSP VNSFSERHQS RDIPIGMPTS TRIISASKPV GLQESGNPFD SSNTGIQSMP NLHPHSLHEY LDNFASGSPY KSSTAFSEMV SDGQKANEGF
501: MMSNVRGVGV DGFNGGGSPA NGGSHRANPN LWSSSNPSNG MMWPNSPSRV NGITSQRIPP VTGFSRASPL MVNMASSPVH HHIGSAPVFN SPFWDRRQTY
601: VAEPPESSGF HFGSHGSMGY PGSSSSHAME MASHKVFSHA GGNRMDANSS NAVSRSSRQM PHFLSGRNPM LSVPGSFDLP NERYRNLSQR RSEFSSSNAE
701: KKLFELDVDR ILRGEDSRTT LMIKNIPNKY TSKMLLAAID EYCKGTYDFL YLPIDFKNKC NVGYAFINLT EPENIVPFYK AFNGKKWEKF NSEKVAYLAY
801: GRIQGKSALI AHFQNSSLMN EDKRCRPILF HTDGPNAGDQ EPFPMGTNIR SRPGKHRTSS IENYNNNFSS SSENREEPPN GTDSF
101: YPEEEPSQSL QEMEAQTIGN LLPDEDDFFA GVVGHKSRAN GGDDLDDCDL FSSVGGMELE GDVFSSVSQR AGKRGGSNVF GVGEPPRGEV SSRVLFVTNM
201: DSIIEDYELR ALFEQYGDVR ALHTAGKNRG FILVSYYDIR AAQNAMRALH GRLLRGRKLD VHYHIPKENS GKENASEGAL LVNNLDSSVS SEEFYRIVSS
301: YGEIREVRRM MPENSQIYIE FFDVRTAEAA LRGLNGLEIA GRQLKLAPYF PEGTSFTSQF AADDVEGGLP KMAFNNLSSA QIGRHYPGIL ASTSTNGGSM
401: RMMHHSVGSP VNSFSERHQS RDIPIGMPTS TRIISASKPV GLQESGNPFD SSNTGIQSMP NLHPHSLHEY LDNFASGSPY KSSTAFSEMV SDGQKANEGF
501: MMSNVRGVGV DGFNGGGSPA NGGSHRANPN LWSSSNPSNG MMWPNSPSRV NGITSQRIPP VTGFSRASPL MVNMASSPVH HHIGSAPVFN SPFWDRRQTY
601: VAEPPESSGF HFGSHGSMGY PGSSSSHAME MASHKVFSHA GGNRMDANSS NAVSRSSRQM PHFLSGRNPM LSVPGSFDLP NERYRNLSQR RSEFSSSNAE
701: KKLFELDVDR ILRGEDSRTT LMIKNIPNKY TSKMLLAAID EYCKGTYDFL YLPIDFKNKC NVGYAFINLT EPENIVPFYK AFNGKKWEKF NSEKVAYLAY
801: GRIQGKSALI AHFQNSSLMN EDKRCRPILF HTDGPNAGDQ EPFPMGTNIR SRPGKHRTSS IENYNNNFSS SSENREEPPN GTDSF
001: MPSDILEPRG VPTPSHFHED IRITPEKQFG FMKNNPMPEG GVDRSSNLPT SSWTSDSYQL SQQSSLSGAL PSFIPNGRTT TNDTHWESSL FSSSLSDLFS
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
101: RKLRLPRSDK LAFMSANREE EPSESLEEME AQTIGNLLPD EDDLFAEVVG EGVHKSRANG GDDLDDCDLF SSVGGMELDG DVFSSVSQRD GKRGSNVSTV
201: AEHPQGEILS RILFVRNVDS SIEDCELGVL FKQFGDVRAL HTAGKNRGFI MVSYYDIRAA QKAARALHGR LLRGRKLDIR YSIPKENPKE NSSEGALWVN
301: NLDSSISNEE LHGIFSSYGE IREVRRTMHE NSQVYIEFFD VRKAKVALQG LNGLEVAGRQ LKLAPTCPEG TSFWPQFASD DGEGGLPKMA FNNLSSAHMG
401: RHFPGILAST SIDGGSIRGM HNSVGSPMNS FIERHQSLDV PIGLPPSARV ISASKPVGLQ EFGNPFDNSK TGIQSMPNLH PHFPDYLDNF ASGSPYKSST
501: TFSEMVSDGQ KANEGFMMSN VRGVGVDGFN GGVIGSPINQ GSHRGNLNLW SNSNSQQHNQ SSGMMWPNSP SRVNGVPSQR IPPVTAFSRA SPLMVNMASS
601: PVHHHIGSAP VLNSPFWDRR QAYVAESPES SGFHLGSPGS MGFPGSSPSH PMDFGSHKVF SHVGGNRMEA NSKNAVLRSS RQMPHLFTGR SPMLSVSGSF
701: DLPNERYRNL SHRRSESNSS NAEKKLYELD VDRILRGEDS RTTLMIKNIP NKYTSKMLLA AIDEYCKGTY DFLYLPIDFK NKCNVGYAFI NLIEPENIVP
801: FYKAFNGKKW EKFNSEKVAS LAYGRIQGKS ALIAHFQNSS LMNEDKRCRP ILFHTAGPNA GDQEPFPMGS NIRSRPGKHR TNSIENYTNF SSSSDNRDEP
901: ANGNDSM
Arabidopsis Description
ML4Protein MEI2-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.