Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78826 | Canola | nucleus | 96.54 | 96.39 |
| CDY61671 | Canola | nucleus | 95.33 | 95.33 |
| Bra030135.1-P | Field mustard | nucleus | 57.53 | 51.9 |
| Bra032316.1-P | Field mustard | nucleus | 61.14 | 51.26 |
| Bra004728.1-P | Field mustard | nucleus | 42.62 | 38.4 |
| Bra000279.1-P | Field mustard | nucleus | 44.73 | 37.74 |
| Bra029297.1-P | Field mustard | nucleus | 39.46 | 29.37 |
| Bra009274.1-P | Field mustard | nucleus | 38.4 | 28.81 |
| Bra010044.1-P | Field mustard | nucleus | 39.01 | 28.28 |
| Bra036347.1-P | Field mustard | plastid | 20.03 | 24.45 |
| Bra004255.1-P | Field mustard | plastid | 20.03 | 24.18 |
| Bra025185.1-P | Field mustard | nucleus | 21.23 | 23.19 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 9.19 | 21.79 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 7.08 | 19.67 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra013285 | EnsemblPlants:Bra013285.1 | EnsemblPlants:Bra013285.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4D9X5 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002545EB4 | SEG:seg | : | : | : |
Description
AT1G29400 (E=3e-091) AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding / nucleotide binding
Coordinates
chrA01:+:4733107..4735808
Molecular Weight (calculated)
73682.2 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.522
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIPNGDFSN ASSDNTSFFS SSLPLLPQQN LNPLDQIASG LNHFNDDQDS HPMDEEQLLA GLMDEINLTS LPNTLDDLEE YDLFGSGGGL ELESDLPRMS
101: FADSKTANGI FQNIAGEHPY GEHPSRTLFV RNINSTVDDS ELRAIFEQYG DIRTLYTACK HRGFVMVSYY DIRASRAAMR ALQSKLLKGR KLDIHFSIPK
201: DNPSEKDVNQ GTLVVFNLAP SVSNKDLENI FGAYGEIKEI RETPNKRHHK FVEFFDVRSA ESALKALNRT DIAGKRIKLE HSRPGGARRN MMLQMNPEYE
301: QDDSRSYLNL ADSSLASSPA GNYWGNSPVD HSPLLSLSKS PLSPTLSSIL NSQRVSHLDH LFPTSHKASG YQQTQSCGTA SSYGSLNSLS GSEFLWGSPS
401: SSLWPMNQFP SNGKAHMFPY SALNGSTHVG SAPSGFFRRS SETSSMGSAA FRGASGNAAP RNMREAGSPS FKVVSSPRHS QLFTGSVSSY QWPVATTASI
501: DGSNMNQVDS KKQFQLDLSK IMSGEDLRTT LMIKNIPNKY TRKMLLAAID ETNRGTYDFL YLPIDFRNKC NVGYAFINMV SPTFIIALHE AFDGKKWDKF
601: NSEKVASLAY ARIQGKTALM AHFQNSSLMN EDRRCHPIVF DGPESSYPFI MDMEHPQEQS THRS
101: FADSKTANGI FQNIAGEHPY GEHPSRTLFV RNINSTVDDS ELRAIFEQYG DIRTLYTACK HRGFVMVSYY DIRASRAAMR ALQSKLLKGR KLDIHFSIPK
201: DNPSEKDVNQ GTLVVFNLAP SVSNKDLENI FGAYGEIKEI RETPNKRHHK FVEFFDVRSA ESALKALNRT DIAGKRIKLE HSRPGGARRN MMLQMNPEYE
301: QDDSRSYLNL ADSSLASSPA GNYWGNSPVD HSPLLSLSKS PLSPTLSSIL NSQRVSHLDH LFPTSHKASG YQQTQSCGTA SSYGSLNSLS GSEFLWGSPS
401: SSLWPMNQFP SNGKAHMFPY SALNGSTHVG SAPSGFFRRS SETSSMGSAA FRGASGNAAP RNMREAGSPS FKVVSSPRHS QLFTGSVSSY QWPVATTASI
501: DGSNMNQVDS KKQFQLDLSK IMSGEDLRTT LMIKNIPNKY TRKMLLAAID ETNRGTYDFL YLPIDFRNKC NVGYAFINMV SPTFIIALHE AFDGKKWDKF
601: NSEKVASLAY ARIQGKTALM AHFQNSSLMN EDRRCHPIVF DGPESSYPFI MDMEHPQEQS THRS
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.