Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15631 | Canola | nucleus | 97.96 | 97.96 |
| Bra032316.1-P | Field mustard | nucleus | 86.28 | 80.18 |
| AT1G29400.3 | Thale cress | nucleus | 81.25 | 74.75 |
| Bra013285.1-P | Field mustard | nucleus | 51.9 | 57.53 |
| Bra004728.1-P | Field mustard | nucleus | 38.72 | 38.67 |
| Bra000279.1-P | Field mustard | nucleus | 41.03 | 38.37 |
| Bra009274.1-P | Field mustard | nucleus | 38.32 | 31.86 |
| Bra029297.1-P | Field mustard | nucleus | 38.32 | 31.61 |
| Bra010044.1-P | Field mustard | nucleus | 38.86 | 31.22 |
| Bra036347.1-P | Field mustard | plastid | 18.07 | 24.45 |
| Bra004255.1-P | Field mustard | plastid | 17.53 | 23.45 |
| Bra025185.1-P | Field mustard | nucleus | 19.16 | 23.19 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 8.56 | 22.5 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 6.11 | 18.83 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra030135 | EnsemblPlants:Bra030135.1 | EnsemblPlants:Bra030135.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4EMW5 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002541094 | SEG:seg | : | : | : |
Description
AT1G29400 (E=2e-217) AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding / nucleotide binding
Coordinates
chrA07:+:6272819..6275921
Molecular Weight (calculated)
81813.5 Da
IEP (calculated)
6.340
GRAVY (calculated)
-0.514
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIPQEEVAG AWGLPSRFGR HNHLPTDSSL FSTSLPLIPY AKLQSSDSRY GFSFTDDAAA SHPFGNMLPD EEDLLTGMMD DLDLTQIPDS PDDYDLFGSG
101: GGMELDTDSR ECFSMSGGPP RLSIPSLAGT GTVTGEHPYG EHPSRTLFVR NINSNVEDSE LKTLFEQYGD IRTLYTTCKH RGFVMISYYD IRAALMAMRS
201: LQNKPLRRRK LDIHFSIPKD NPAEKDMNQG TLVVFNLDPS ITNDDLYVIF GVHGEIKEIR ETPHKWHHKF VEFYDVRDAE AALKALNRCE IAGKRIKVEP
301: SRPGGARRSL MLQLNQELED DDLHYLPLLG SPMANSPPST WMKNPVEGSP LQSVMSRSPV FGFSPTRNSN LSGLSSAPNS QAPGSKLAPI GRAQTGSNVF
401: QETKMDNKYA GNVSPSGPLI SNGGGIETLS GSEFLWGSPN SRSEPSNASV WSTSSSGIPF SSAHVRRSVP SPHHHLNVGS APSGVPLEKR FGFFPESSKD
501: TMFMNSFGLN GGSFPSKMAS HGVMVEYRMM SSPRFISLLN PGRFTTSGFD GLYENERARR VENYSSQVES RKQFQLDLEK IMNGEDSRTT LMIKNIPNKY
601: TSKMLLAAID EKNQGTYNFL YLPIDFKNKC NVGYAFINIL SPDLIIPFYE AFNGKKWEKF NSEKVASLAY ARIQGKCALI SHFQNSSLMN EDMRCRPIIF
701: DTPNSSESVQ QVIGKETKSV DLRDSELNDD GGREKW
101: GGMELDTDSR ECFSMSGGPP RLSIPSLAGT GTVTGEHPYG EHPSRTLFVR NINSNVEDSE LKTLFEQYGD IRTLYTTCKH RGFVMISYYD IRAALMAMRS
201: LQNKPLRRRK LDIHFSIPKD NPAEKDMNQG TLVVFNLDPS ITNDDLYVIF GVHGEIKEIR ETPHKWHHKF VEFYDVRDAE AALKALNRCE IAGKRIKVEP
301: SRPGGARRSL MLQLNQELED DDLHYLPLLG SPMANSPPST WMKNPVEGSP LQSVMSRSPV FGFSPTRNSN LSGLSSAPNS QAPGSKLAPI GRAQTGSNVF
401: QETKMDNKYA GNVSPSGPLI SNGGGIETLS GSEFLWGSPN SRSEPSNASV WSTSSSGIPF SSAHVRRSVP SPHHHLNVGS APSGVPLEKR FGFFPESSKD
501: TMFMNSFGLN GGSFPSKMAS HGVMVEYRMM SSPRFISLLN PGRFTTSGFD GLYENERARR VENYSSQVES RKQFQLDLEK IMNGEDSRTT LMIKNIPNKY
601: TSKMLLAAID EKNQGTYNFL YLPIDFKNKC NVGYAFINIL SPDLIIPFYE AFNGKKWEKF NSEKVASLAY ARIQGKCALI SHFQNSSLMN EDMRCRPIIF
701: DTPNSSESVQ QVIGKETKSV DLRDSELNDD GGREKW
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.