Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48336 | Canola | nucleus | 97.1 | 99.48 |
| CDX99820 | Canola | nucleus | 98.48 | 98.48 |
| Bra030135.1-P | Field mustard | nucleus | 80.18 | 86.28 |
| AT1G29400.3 | Thale cress | nucleus | 85.35 | 84.5 |
| Bra013285.1-P | Field mustard | nucleus | 51.26 | 61.14 |
| Bra004728.1-P | Field mustard | nucleus | 38.76 | 41.66 |
| Bra000279.1-P | Field mustard | nucleus | 40.91 | 41.17 |
| Bra029297.1-P | Field mustard | nucleus | 37.63 | 33.41 |
| Bra010044.1-P | Field mustard | nucleus | 38.26 | 33.08 |
| Bra009274.1-P | Field mustard | nucleus | 36.36 | 32.54 |
| Bra004255.1-P | Field mustard | plastid | 17.05 | 24.55 |
| Bra036347.1-P | Field mustard | plastid | 16.79 | 24.45 |
| Bra025185.1-P | Field mustard | nucleus | 17.93 | 23.36 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 8.21 | 23.21 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 5.81 | 19.25 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra032316 | EnsemblPlants:Bra032316.1 | EnsemblPlants:Bra032316.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4EU34 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000254269A | SEG:seg | : | : | : |
Description
AT1G29400 (E=0.0) AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding / nucleotide binding
Coordinates
chrA09:+:22599356..22602567
Molecular Weight (calculated)
87481.7 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.564
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIPQDVAGA WGIPSGMGRH RHLPNDATLF SASLPVLPHG KLQSSDSRDG FPFIDDAAAP RPIHESVDDI ESHSIGNMLP DEDDLLTGMM DDLDLTELPP
101: DSADDYDLFG SGGGMELDAD FRDGLSMNGG PPRLSISSAV PQFNVQNGAG TVAGEHPYGE HPSRTLFVRN INSNVEDSEL KTLFEQYGDI RTLYTTCKHR
201: GFVMISYYDI RAARMAMRSL QNKPLRRRKL DIHFSIPKDN PSEKDMNQGT LVVFNLDPSI TNDDLHGIFG AHGEIKEIRE TPHKRHHKFV EFYDVRAAEA
301: ALKALNRCEI AGKRIKVEPS RPGGARRSLM LQLNQELEND DLHYLPLLGS PMANSPPSNW LQMNSPVEGS PLQSVLSRSP VFGVSPTRNS HLSGLASALN
401: SQGPSSKLAP IGRSPVASNV FQQSSHLFQE PKPDNKYTGN LSPSGPLISN GGGIETLSGS EFLWGSPNTR SEPSNSSVWS TSSTGVPFSS ARVDRSVPFL
501: HQTQNRSHHP HHHHHLHVGS APSNVPLEKH FGFFPESSKD TMFMNSSGMG GGLNGVSFPS RMANHGIMNP ENGFSSYRMM SSPRFSPMFL SSGLNPGRFP
601: AGVDGLYENG RPRRVENSSS QVESRKQFQL DLEKIMNGDD SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF INMLSPDLII
701: PFYEAFNGKK WEKFNSEKVA SLAYARIQGK TALIAHFQNS SLMNEDMRCR PIIFDTPNSS DSVEQVIVKE TKNGDLFDSE VNDDDDDGRE KS
101: DSADDYDLFG SGGGMELDAD FRDGLSMNGG PPRLSISSAV PQFNVQNGAG TVAGEHPYGE HPSRTLFVRN INSNVEDSEL KTLFEQYGDI RTLYTTCKHR
201: GFVMISYYDI RAARMAMRSL QNKPLRRRKL DIHFSIPKDN PSEKDMNQGT LVVFNLDPSI TNDDLHGIFG AHGEIKEIRE TPHKRHHKFV EFYDVRAAEA
301: ALKALNRCEI AGKRIKVEPS RPGGARRSLM LQLNQELEND DLHYLPLLGS PMANSPPSNW LQMNSPVEGS PLQSVLSRSP VFGVSPTRNS HLSGLASALN
401: SQGPSSKLAP IGRSPVASNV FQQSSHLFQE PKPDNKYTGN LSPSGPLISN GGGIETLSGS EFLWGSPNTR SEPSNSSVWS TSSTGVPFSS ARVDRSVPFL
501: HQTQNRSHHP HHHHHLHVGS APSNVPLEKH FGFFPESSKD TMFMNSSGMG GGLNGVSFPS RMANHGIMNP ENGFSSYRMM SSPRFSPMFL SSGLNPGRFP
601: AGVDGLYENG RPRRVENSSS QVESRKQFQL DLEKIMNGDD SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF INMLSPDLII
701: PFYEAFNGKK WEKFNSEKVA SLAYARIQGK TALIAHFQNS SLMNEDMRCR PIIFDTPNSS DSVEQVIVKE TKNGDLFDSE VNDDDDDGRE KS
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.