Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79841 | Canola | nucleus | 95.52 | 90.84 |
| Bra000279.1-P | Field mustard | nucleus | 82.5 | 77.26 |
| AT2G42890.1 | Thale cress | nucleus | 85.48 | 74.73 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 49.66 | 43.16 |
| Bra013285.1-P | Field mustard | nucleus | 38.4 | 42.62 |
| PGSC0003DMT400054712 | Potato | nucleus | 47.35 | 41.11 |
| Solyc07g056340.2.1 | Tomato | nucleus | 44.78 | 40.94 |
| Solyc10g007770.2.1 | Tomato | nucleus, plastid | 47.08 | 40.87 |
| KRH46056 | Soybean | nucleus, plastid | 47.22 | 40.65 |
| KRG98918 | Soybean | plastid | 47.08 | 40.49 |
| PGSC0003DMT400044564 | Potato | nucleus | 46.27 | 40.12 |
| Bra032316.1-P | Field mustard | nucleus | 41.66 | 38.76 |
| Bra030135.1-P | Field mustard | nucleus | 38.67 | 38.72 |
| Bra010044.1-P | Field mustard | nucleus | 35.01 | 28.17 |
| Bra029297.1-P | Field mustard | nucleus | 33.92 | 28.03 |
| Bra009274.1-P | Field mustard | nucleus | 33.11 | 27.57 |
| Bra004255.1-P | Field mustard | plastid | 17.23 | 23.09 |
| Bra036347.1-P | Field mustard | plastid | 16.42 | 22.24 |
| Bra025185.1-P | Field mustard | nucleus | 17.91 | 21.71 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 6.78 | 17.86 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 5.16 | 15.9 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 5.29 | 11.64 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EnsemblPlantsGene:Bra004728 | EnsemblPlants:Bra004728.1 | EnsemblPlants:Bra004728.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4CKJ3 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002547996 | SEG:seg | : | : | : |
Description
AT2G42890 (E=8e-167) AML2 | AML2 (ARABIDOPSIS-MEI2-LIKE 2); RNA binding / nucleic acid binding / nucleotide binding
Coordinates
chrA05:+:1548021..1551340
Molecular Weight (calculated)
81725.2 Da
IEP (calculated)
5.442
GRAVY (calculated)
-0.589
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLELRSTE TFNGGSASDL SMFSSSLPTL LHEKLNMTDS DSWLSLDDKL GVGNSENDSL EDVEPDSLET LLPEDENELL PGLIDELNFN GLPDELEDCD
101: VFCTGGGMEL DVESQDNHAA NAFASRKCPN TSGRVSVEHP NGEHPSRTLF VRNINSSVED SELTALFEPF GEIRSLYTAC KSRGFVMISY YDIRASHAAM
201: RALQNTLLRK RTLDIHFSIP KENPSEKDMN QGTLVIFNVD TTVSNDELLK LFGAHGEIRE IRETPNRSFH RFIEYYDVRD AESALKALDR SEIGGKCIKL
301: ELSRPGGARR VSVPSTSQDL DRNEVANFFN QVANSPPGNW PVGSPPSHAF PRPHGLCNMP GLASILPGHQ PSRYQGLLNH PNQTILNKGL MHNVAYGQPH
401: SLPEHIGGGI SNSMRFIAPP HSSGFGTSSD NRYRWGSPPQ HMNYPGYTDA SSSSSKHGFP FSERQGSLLG KYQHHVGSAP SSSHFNNHMI PFGFGDMGVD
501: KSYPNAHGQA NVGVNFTGSG MSLLPTVPFG GSRGLQSVRR EPFAEEGRIT HFETQLTDGG RYHIDLDRIA TGDDTRTTLI IKNIPNKYTY MMLVAEIDEK
601: HKGDYDFLCL PIEFKNKCNM GYAFVNMVSP LHIVPFQQTF NGKVWENFNS GKVASLAYAE IQGKSALASY MQNPSPMKDE KHLFPQVSHY NDDDGQDSND
701: QKQPFSSIWN ITTPDPDWSY TNSRENINSK NIVEESS
101: VFCTGGGMEL DVESQDNHAA NAFASRKCPN TSGRVSVEHP NGEHPSRTLF VRNINSSVED SELTALFEPF GEIRSLYTAC KSRGFVMISY YDIRASHAAM
201: RALQNTLLRK RTLDIHFSIP KENPSEKDMN QGTLVIFNVD TTVSNDELLK LFGAHGEIRE IRETPNRSFH RFIEYYDVRD AESALKALDR SEIGGKCIKL
301: ELSRPGGARR VSVPSTSQDL DRNEVANFFN QVANSPPGNW PVGSPPSHAF PRPHGLCNMP GLASILPGHQ PSRYQGLLNH PNQTILNKGL MHNVAYGQPH
401: SLPEHIGGGI SNSMRFIAPP HSSGFGTSSD NRYRWGSPPQ HMNYPGYTDA SSSSSKHGFP FSERQGSLLG KYQHHVGSAP SSSHFNNHMI PFGFGDMGVD
501: KSYPNAHGQA NVGVNFTGSG MSLLPTVPFG GSRGLQSVRR EPFAEEGRIT HFETQLTDGG RYHIDLDRIA TGDDTRTTLI IKNIPNKYTY MMLVAEIDEK
601: HKGDYDFLCL PIEFKNKCNM GYAFVNMVSP LHIVPFQQTF NGKVWENFNS GKVASLAYAE IQGKSALASY MQNPSPMKDE KHLFPQVSHY NDDDGQDSND
701: QKQPFSSIWN ITTPDPDWSY TNSRENINSK NIVEESS
001: MVSSIIAVAE GKKMELEPNK SLSADMPSLL SRSSEAFNGG TGYRSSSDLS MFSSSLPTLF HEKLNMTDSD SWLSFDESSP NLNKLVIGNS EKDSLEDVEP
101: DALEILLPED ENELLPGLID ELNFTGLPDE LDDLEECDVF CTGGGMELDV ESQDNHAVDA SGMQISDRGA ANAFVPRKRP NTAGRVSVEH PNGEHPSRTL
201: FVRNINSSVE DSELSALFEP FGEIRSLYTA CKSRGFVMIS YYDIRAAHAA MRALQNTLLR KRTLDIHFSI PKENPSEKDM NQGTLVIFNV DTTVSNDELL
301: QLFGAYGEIR EIRETPNRRF HRFIEYYDVR DAETALKALN RSEIGGKCIK LELSRPGGAR RLSVPSQSQD LERTEVTNFY NQVGSHVANS PPGNWPIGSP
401: VKGSPSHAFT RPHGLGMVRP VNSDNMPGLA SILPAHPSSF HGFSPVSNDQ GLLNHSNQTI LNKGLMHNIS YGQPHSLPEH ITGGISNSMR FIAPHSSGFG
501: TSSDHRYRWG SPPQHMNYPG YTGVSSSSSS TERPFTVRHG FPFAERQASL LGKYQHHVGS APSSIHFNTQ MNCYTGSPEI PLGFSDMGIN RNYNSAHGKA
601: NLGVSLPGNS SEQDFTGFGM SSMPTVPFGG SRGLQSVRPE PFAEQGRIHN HESHNQNQFI DGGRYHIDLD RIASGDEIRT TLIIKNIPNK YTYKMLVAEI
701: DEKHKGDYDF LCLPTDFKNK CNMGHAFINM VSPLHIVPFQ QTFNGKIWEK FNSGKVASLA YAEIQGKSAL ASYMQTPSSM KEQKQLFPEV SYHDDGQDAN
801: DHEQLFSSIW NITAPDSDWS YTMDLIENPR ENGNSKNAAE ESS
101: DALEILLPED ENELLPGLID ELNFTGLPDE LDDLEECDVF CTGGGMELDV ESQDNHAVDA SGMQISDRGA ANAFVPRKRP NTAGRVSVEH PNGEHPSRTL
201: FVRNINSSVE DSELSALFEP FGEIRSLYTA CKSRGFVMIS YYDIRAAHAA MRALQNTLLR KRTLDIHFSI PKENPSEKDM NQGTLVIFNV DTTVSNDELL
301: QLFGAYGEIR EIRETPNRRF HRFIEYYDVR DAETALKALN RSEIGGKCIK LELSRPGGAR RLSVPSQSQD LERTEVTNFY NQVGSHVANS PPGNWPIGSP
401: VKGSPSHAFT RPHGLGMVRP VNSDNMPGLA SILPAHPSSF HGFSPVSNDQ GLLNHSNQTI LNKGLMHNIS YGQPHSLPEH ITGGISNSMR FIAPHSSGFG
501: TSSDHRYRWG SPPQHMNYPG YTGVSSSSSS TERPFTVRHG FPFAERQASL LGKYQHHVGS APSSIHFNTQ MNCYTGSPEI PLGFSDMGIN RNYNSAHGKA
601: NLGVSLPGNS SEQDFTGFGM SSMPTVPFGG SRGLQSVRPE PFAEQGRIHN HESHNQNQFI DGGRYHIDLD RIASGDEIRT TLIIKNIPNK YTYKMLVAEI
701: DEKHKGDYDF LCLPTDFKNK CNMGHAFINM VSPLHIVPFQ QTFNGKIWEK FNSGKVASLA YAEIQGKSAL ASYMQTPSSM KEQKQLFPEV SYHDDGQDAN
801: DHEQLFSSIW NITAPDSDWS YTMDLIENPR ENGNSKNAAE ESS
Arabidopsis Description
ML2ML2 [Source:UniProtKB/TrEMBL;Acc:A0A178VQK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.