Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044564 | Potato | nucleus | 93.18 | 88.35 |
| Solyc10g007770.2.1 | Tomato | nucleus, plastid | 76.55 | 72.67 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 68.11 | 64.74 |
| KRH46056 | Soybean | nucleus, plastid | 64.14 | 60.4 |
| KRG98918 | Soybean | plastid | 64.02 | 60.21 |
| Solyc02g071270.1.1 | Tomato | extracellular | 53.85 | 51.24 |
| Bra004728.1-P | Field mustard | nucleus | 40.94 | 44.78 |
| Bra000279.1-P | Field mustard | nucleus | 43.67 | 44.73 |
| AT2G42890.1 | Thale cress | nucleus | 44.66 | 42.7 |
| Solyc05g023740.2.1 | Tomato | nucleus | 42.31 | 35.08 |
| Solyc01g110220.1.1 | Tomato | cytosol | 7.57 | 25.0 |
| Solyc01g110260.1.1 | Tomato | cytosol | 5.58 | 24.19 |
| Solyc05g013930.1.1 | Tomato | nucleus | 18.36 | 23.34 |
| CDY71762 | Canola | nucleus | 6.7 | 22.5 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 5.46 | 22.0 |
| Solyc05g056360.1.1 | Tomato | cytosol | 8.81 | 21.52 |
| Solyc01g110200.1.1 | Tomato | plastid | 7.07 | 20.58 |
| Solyc01g110230.1.1 | Tomato | cytosol | 6.2 | 19.68 |
| Solyc01g110210.1.1 | Tomato | nucleus | 6.2 | 19.46 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 6.33 | 15.22 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K4CGG7 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PFscan:PS51257 | PANTHER:PTHR44127 |
| PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:Solyc07g056340.2 |
| EnsemblPlants:Solyc07g056340.2.1 | UniParc:UPI000276B06B | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:-:64207410..64213829
Molecular Weight (calculated)
89462.0 Da
IEP (calculated)
6.364
GRAVY (calculated)
-0.532
Length
806 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGKFTSEQL HIIHQLMQAC FLARCLFCHM QNVLNFAESE NYSHSTDDSS PSLNRLHLED EIKDPLEEEP NSDGCFLPGD EDELLAGLMD DFDLSGLPTQ
101: LEDLEDDFFG SGGGLELESE TLDNSLNGFA KLSMSDGILG SIVGHHVFSN SAGTVTGEHP YGEHPSRTLF VRNINSNVED SELQSLFEQY GDIRTLYTSC
201: KHRGFVMISY YDIRAARTAM RMLQHKPLRR RKLDIHFSIP KENPSEKDIN QGTLVIFNLD PSVSNEDLLQ IFGDYGEVKE IRETPHKRHH KFIEFYDVRA
301: AEAALKALNR SDIAGKRIKL EPSRPGGARR SLMQQLSQDY EHEEVRTFRH SVGSPIASPP GNWSNFGSPV EHSSLLGYNQ SRDMRNLSPV NGNHMPGLAA
401: ILPGHFSSPK IAPIGKDPGR FGSLNHAITS PKSVQGMGYQ QSYSVPDHKP HLSFGSMSHG EPKSSGIGTL SGPQFLWGSS PIQSERTDSS VWSNSSLAHP
501: FAANEQGQGY PYSHRQGLFP GSHHVGSAPS GIPLDRRLGF FSESPETSYM NQVAYGSSGS SHSHGMSIGR LGSMNMAGSP ISRMIPLPRN GPIFFGNGSY
601: GGTGTTNNEG IIEQVRSRRV ESGSEIDNKK QYLLDLEKIT SGEDARTTLM IKNIPNKYTS RMLLTAIDET HKNTYDFLYL PIDFKNKCNV GYAFINMVSP
701: SHIISFYEVF NGKKWEKFNS EKVASLAYAR IQGKVALVAH FQNSSLMNED KRCRPILFRS EGQETADQEL LPTNNLNICV RLPDGSYSGD SLDSPNSDVD
801: AKLYMH
101: LEDLEDDFFG SGGGLELESE TLDNSLNGFA KLSMSDGILG SIVGHHVFSN SAGTVTGEHP YGEHPSRTLF VRNINSNVED SELQSLFEQY GDIRTLYTSC
201: KHRGFVMISY YDIRAARTAM RMLQHKPLRR RKLDIHFSIP KENPSEKDIN QGTLVIFNLD PSVSNEDLLQ IFGDYGEVKE IRETPHKRHH KFIEFYDVRA
301: AEAALKALNR SDIAGKRIKL EPSRPGGARR SLMQQLSQDY EHEEVRTFRH SVGSPIASPP GNWSNFGSPV EHSSLLGYNQ SRDMRNLSPV NGNHMPGLAA
401: ILPGHFSSPK IAPIGKDPGR FGSLNHAITS PKSVQGMGYQ QSYSVPDHKP HLSFGSMSHG EPKSSGIGTL SGPQFLWGSS PIQSERTDSS VWSNSSLAHP
501: FAANEQGQGY PYSHRQGLFP GSHHVGSAPS GIPLDRRLGF FSESPETSYM NQVAYGSSGS SHSHGMSIGR LGSMNMAGSP ISRMIPLPRN GPIFFGNGSY
601: GGTGTTNNEG IIEQVRSRRV ESGSEIDNKK QYLLDLEKIT SGEDARTTLM IKNIPNKYTS RMLLTAIDET HKNTYDFLYL PIDFKNKCNV GYAFINMVSP
701: SHIISFYEVF NGKKWEKFNS EKVASLAYAR IQGKVALVAH FQNSSLMNED KRCRPILFRS EGQETADQEL LPTNNLNICV RLPDGSYSGD SLDSPNSDVD
801: AKLYMH
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.