Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22908117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054712 | Potato | nucleus | 98.35 | 98.35 |
| Solyc07g056340.2.1 | Tomato | nucleus | 72.67 | 76.55 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 71.38 | 71.46 |
| KRH46056 | Soybean | nucleus, plastid | 67.26 | 66.71 |
| KRG98918 | Soybean | plastid | 67.14 | 66.51 |
| Solyc02g071270.1.1 | Tomato | extracellular | 53.95 | 54.07 |
| Bra000279.1-P | Field mustard | nucleus | 44.17 | 47.65 |
| Bra004728.1-P | Field mustard | nucleus | 40.87 | 47.08 |
| AT2G42890.1 | Thale cress | nucleus | 45.23 | 45.55 |
| Solyc05g023740.2.1 | Tomato | nucleus | 42.99 | 37.55 |
| CDY71762 | Canola | nucleus | 8.01 | 28.33 |
| Solyc01g110220.1.1 | Tomato | cytosol | 7.77 | 27.05 |
| Solyc01g110260.1.1 | Tomato | cytosol | 5.54 | 25.27 |
| Solyc05g013930.1.1 | Tomato | nucleus | 18.61 | 24.92 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 5.77 | 24.5 |
| Solyc01g110210.1.1 | Tomato | nucleus | 6.83 | 22.57 |
| Solyc05g056360.1.1 | Tomato | cytosol | 8.72 | 22.42 |
| Solyc01g110230.1.1 | Tomato | cytosol | 6.6 | 22.05 |
| Solyc01g110200.1.1 | Tomato | plastid | 7.18 | 22.02 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 6.36 | 16.12 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K4CXV6 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:Solyc10g007770.2 | EnsemblPlants:Solyc10g007770.2.1 |
| UniParc:UPI000276B5B9 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:1999586..2005684
Molecular Weight (calculated)
92651.6 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.556
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPLKKPMS NDSEAASTKA PYKEKNAWAI PLGSTVYHAS TDTSLFSSSL PVLPHAKLNF NESEHYGQSI DDSSPSLSKL QLEDKIKDPL EEVESSPVGF
101: LLPGDEDELL AGLMDDFDLS GLPSQLEDLE DDFFGSGGLE MEPEDQNNLL NGFATLSMYD GIPGSSSGHY SVPNGAATVV GEHPYGEHPS RTLFVRNINS
201: NVEDSELKSL FEQFGDIRTL YTACKHRGFV MISYYDIRAA RTAMRALQNK PLRRRKLDIH FSIPKENPSE KDINQGTLVV FNLDPSVSNE DLRQIFGVYG
301: EVKEIRETPH KRHHKFIEFY DVRAADAALK ALNRSDIAGK RIKLEPSRPG GARRNLMQQL TQELEHDEIR SFRHSVGSPV ASSPPGSWSN FGSPVEPNPL
401: RGYSQSPGLR NLSPVNGNLM PGLASILPGH LSSPKIAPIG KDPARVGHLN QVTSSPKSSQ GMGYQHSFSV PEQKPALSIG SVPFGNSKAS GTGTLSGPQF
501: LWGSPPIHSE RSDSPIWPAS SMARPFASNG QGQGYLHSRR QSSFLGSHHV GSAPSGNPLD RHFGFFPESP QTSYMNPHAF GSGGSSHNSA NQVMNIGSLG
601: AMNMGGALTG NFTESGSPSS RMMPLTRNGP IFFGNGSYGG AGTVNGEGLI ERGRNRKIES GGNQIDNKKQ YQLDLEKIMS GGDTRTTLMI KNIPNKYTSK
701: MLLAAIDESH KSTYDFIYLP IDFKNKCNVG YAFINMVSPA HIVSFYEAFN GKKWEKFNSE KVASLAYARI QGKVALVTHF QNSSLMNEDK RCRPILFQSE
801: GQEAADEETL PSSNLNICIR RPDGSYSGDS LDSPTSDIDG RPELFTGSS
101: LLPGDEDELL AGLMDDFDLS GLPSQLEDLE DDFFGSGGLE MEPEDQNNLL NGFATLSMYD GIPGSSSGHY SVPNGAATVV GEHPYGEHPS RTLFVRNINS
201: NVEDSELKSL FEQFGDIRTL YTACKHRGFV MISYYDIRAA RTAMRALQNK PLRRRKLDIH FSIPKENPSE KDINQGTLVV FNLDPSVSNE DLRQIFGVYG
301: EVKEIRETPH KRHHKFIEFY DVRAADAALK ALNRSDIAGK RIKLEPSRPG GARRNLMQQL TQELEHDEIR SFRHSVGSPV ASSPPGSWSN FGSPVEPNPL
401: RGYSQSPGLR NLSPVNGNLM PGLASILPGH LSSPKIAPIG KDPARVGHLN QVTSSPKSSQ GMGYQHSFSV PEQKPALSIG SVPFGNSKAS GTGTLSGPQF
501: LWGSPPIHSE RSDSPIWPAS SMARPFASNG QGQGYLHSRR QSSFLGSHHV GSAPSGNPLD RHFGFFPESP QTSYMNPHAF GSGGSSHNSA NQVMNIGSLG
601: AMNMGGALTG NFTESGSPSS RMMPLTRNGP IFFGNGSYGG AGTVNGEGLI ERGRNRKIES GGNQIDNKKQ YQLDLEKIMS GGDTRTTLMI KNIPNKYTSK
701: MLLAAIDESH KSTYDFIYLP IDFKNKCNVG YAFINMVSPA HIVSFYEAFN GKKWEKFNSE KVASLAYARI QGKVALVTHF QNSSLMNEDK RCRPILFQSE
801: GQEAADEETL PSSNLNICIR RPDGSYSGDS LDSPTSDIDG RPELFTGSS
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.