Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005752 | Potato | nucleus | 96.19 | 95.8 |
| VIT_01s0150g00090.t01 | Wine grape | nucleus | 65.23 | 64.04 |
| KRH45198 | Soybean | nucleus | 39.2 | 51.63 |
| Solyc10g007770.2.1 | Tomato | nucleus, plastid | 37.55 | 42.99 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 26.13 | 42.83 |
| Solyc07g056340.2.1 | Tomato | nucleus | 35.08 | 42.31 |
| Solyc02g071270.1.1 | Tomato | extracellular | 35.7 | 40.97 |
| Os05t0102800-01 | Rice | nucleus | 39.09 | 39.79 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 38.07 | 39.53 |
| Zm00001d035763_P003 | Maize | plastid | 38.48 | 39.45 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 37.65 | 38.98 |
| OQU77194 | Sorghum | plastid | 31.89 | 37.9 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 37.45 | 37.56 |
| Solyc01g110220.1.1 | Tomato | cytosol | 6.28 | 25.0 |
| Solyc05g013930.1.1 | Tomato | nucleus | 15.95 | 24.45 |
| Solyc01g110260.1.1 | Tomato | cytosol | 4.42 | 23.12 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 4.22 | 20.5 |
| Solyc01g110200.1.1 | Tomato | plastid | 5.76 | 20.22 |
| Solyc01g110210.1.1 | Tomato | nucleus | 5.25 | 19.84 |
| Solyc05g056360.1.1 | Tomato | cytosol | 6.69 | 19.7 |
| Solyc01g110230.1.1 | Tomato | cytosol | 4.84 | 18.5 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K4BZL3 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:Solyc05g023740.2 | EnsemblPlants:Solyc05g023740.2.1 |
| UniParc:UPI00027658D6 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:29171601..29178176
Molecular Weight (calculated)
107566.0 Da
IEP (calculated)
6.490
GRAVY (calculated)
-0.630
Length
972 amino acids
Sequence
(BLAST)
(BLAST)
001: MRELQGLSPS SYFSEELCFR DERQVGFWKA NSLQNYHGLK SDDALQRAAV RSSPFENHIS LGSPTTKHFE HHDSHLKQDK NVNSIIERRA VGIERASHSL
101: PRGLDYNVGV RSIVSTDLAS YPTEDDKISV LGGQCENGLF SSSLSELFSR KLRLPTNYSP HGHSVGAADS HYEEERFESL KELEAHAIGN LLPDDDDLLA
201: GVTDGLDYVG QPYAGDETED LDLFSSVGGM DLGEDGSSTG QQNSEYAGNY TLPLGDSNAA IGSQKPFEEN PSRTLFVRNV NSSVEDSELQ TLFEQYGDIR
301: TLYTACKHRG FVMISYYDIR ASQNAMKALQ NNPLRRRKLD IHFSIPKDNP SEKNANQGTL LVFNLDSSVS NDELRQIFGV YGEIKEICET QHRSHHKYIE
401: FYDVRAAEAA LRALNRSDVA GKQIMIEAIH PGGTRRRLSQ QFPSELEQDE PGLYLHQNSP SSLATGFSGA LPHGGHGLSM ENGSILGRQS ASGSAMNSYL
501: DNAFDCGLSF SVPNSLLRLE SKGGNQANVG ETGHLQSQFN FDLRGTSGLH PHSLPEYHDG LSNGTTSISP GGISANMNIR PLEAIENRKF SRVGPNGQPV
601: ELNEVFTPNG TANCPSPGHQ YMWSNSHQSQ PQGMMWPNSP TYVGGVCASR PQQLHSVPRA PSHMLNALVP INNHHVGSAP SVNPSLSLWD RRHAYAGESP
701: DASGFHPGSL GSMRISGNSP HPLEFIPHNV FSRTGGSCID LPMSSSNVGH QQRNLMFPGR AQIIPMISSF DSPNERMRSR RNEGNSSQTD NKKQFELDIE
801: RIARGDDKRT TLMIKNIPNK YTSKMLLAAI DERHRGTYDF IYLPIDFKNK CNVGYAFINM TEPSLIVPFY HAFNGKKWEK FNSEKVASLA YARIQGKSAL
901: IAHFQNSSLM NEDKRCRPIL FHTDGPNAGD QVPFPMGVSM RPRSSKNRAG TSEESYQESK DFIIEESVNE SN
101: PRGLDYNVGV RSIVSTDLAS YPTEDDKISV LGGQCENGLF SSSLSELFSR KLRLPTNYSP HGHSVGAADS HYEEERFESL KELEAHAIGN LLPDDDDLLA
201: GVTDGLDYVG QPYAGDETED LDLFSSVGGM DLGEDGSSTG QQNSEYAGNY TLPLGDSNAA IGSQKPFEEN PSRTLFVRNV NSSVEDSELQ TLFEQYGDIR
301: TLYTACKHRG FVMISYYDIR ASQNAMKALQ NNPLRRRKLD IHFSIPKDNP SEKNANQGTL LVFNLDSSVS NDELRQIFGV YGEIKEICET QHRSHHKYIE
401: FYDVRAAEAA LRALNRSDVA GKQIMIEAIH PGGTRRRLSQ QFPSELEQDE PGLYLHQNSP SSLATGFSGA LPHGGHGLSM ENGSILGRQS ASGSAMNSYL
501: DNAFDCGLSF SVPNSLLRLE SKGGNQANVG ETGHLQSQFN FDLRGTSGLH PHSLPEYHDG LSNGTTSISP GGISANMNIR PLEAIENRKF SRVGPNGQPV
601: ELNEVFTPNG TANCPSPGHQ YMWSNSHQSQ PQGMMWPNSP TYVGGVCASR PQQLHSVPRA PSHMLNALVP INNHHVGSAP SVNPSLSLWD RRHAYAGESP
701: DASGFHPGSL GSMRISGNSP HPLEFIPHNV FSRTGGSCID LPMSSSNVGH QQRNLMFPGR AQIIPMISSF DSPNERMRSR RNEGNSSQTD NKKQFELDIE
801: RIARGDDKRT TLMIKNIPNK YTSKMLLAAI DERHRGTYDF IYLPIDFKNK CNVGYAFINM TEPSLIVPFY HAFNGKKWEK FNSEKVASLA YARIQGKSAL
901: IAHFQNSSLM NEDKRCRPIL FHTDGPNAGD QVPFPMGVSM RPRSSKNRAG TSEESYQESK DFIIEESVNE SN
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.