Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005752 | Potato | nucleus | 65.35 | 66.29 |
| Solyc05g023740.2.1 | Tomato | nucleus | 64.04 | 65.23 |
| VIT_17s0000g00240.t01 | Wine grape | nucleus | 64.34 | 63.83 |
| VIT_00s0239g00110.t01 | Wine grape | plastid | 7.07 | 63.64 |
| KRH45198 | Soybean | nucleus | 42.93 | 57.59 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 42.02 | 49.06 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 41.82 | 46.83 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 27.27 | 45.53 |
| Os05t0102800-01 | Rice | nucleus | 42.32 | 43.87 |
| Zm00001d035763_P003 | Maize | plastid | 41.72 | 43.57 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 40.91 | 43.27 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 41.01 | 43.24 |
| OQU77194 | Sorghum | plastid | 34.95 | 42.3 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 40.4 | 41.28 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 4.44 | 31.43 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 7.68 | 25.08 |
| VIT_01s0137g00320.t01 | Wine grape | nucleus | 15.76 | 23.71 |
| VIT_14s0219g00270.t01 | Wine grape | plastid | 13.13 | 23.26 |
Protein Annotations
| EntrezGene:100260954 | wikigene:100260954 | Gene3D:3.30.70.330 | MapMan:35.1 | ProteinID:CCB52264 | ProteinID:CCB52264.1 |
| UniProt:F6HJ67 | EMBL:FN595770 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | EntrezGene:LOC100260954 | wikigene:LOC100260954 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 |
| InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 |
| PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | TIGR:TC54842 |
| UniParc:UPI0002107F95 | ArrayExpress:VIT_01s0150g00090 | EnsemblPlantsGene:VIT_01s0150g00090 | EnsemblPlants:VIT_01s0150g00090.t01 | unigene:Vvi.10695 | RefSeq:XP_002267714 |
| RefSeq:XP_002267714.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:22509944..22524659
Molecular Weight (calculated)
109305.0 Da
IEP (calculated)
6.405
GRAVY (calculated)
-0.630
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDLHGWSRS SYFSEEACLP SERQVGFWKA ETMADRNAGG KSIASSPMEK LIPTESQTVN CWEQSEPYLI RDQKVNLSSE RHAVGAERVV RNSLDMWRTV
101: EHDLGTRSNA NVHSASYFME GDKINMTGSQ YENGLFSSSL SELFNRKLRL SSNNGLYGHS VDTVAPHHEE EDLFESLEEI EAQTIGNLLP NEDDLLSGVA
201: DVLDYVVQPS NGDDLEDIDL FSSVGGMDLG DDGSSAGQRN SEYPGGMSNG QLGGSNGSAV GEHPYGEHPS RTLFVRNINS NVEDSELRIL FEQYGDIRAL
301: YTACKHRGFV MISYYDIRAA RNAMRALQNK PLRRRKLDIH YSIPKDNPPE KDVNQGTLVV FNLDPSVTND ELLQIFGVYG EIKEIRETPH RSHHKFVEFY
401: DIRAAEAALR ALNRSDIAGK RIKLEPSRPG GARRLMQQFP SELEEDESGL YLQQNNTPNN STTGFPALLT GPASLGAITS SSMENGTIMG VHSGIPFPIR
501: PFLENVSHHG ISSSVPNTLP SLLSVESVGS QSGLAESSRS QGQLKFDFRG TQSLHPHSLP EYNDGLANGA PCNPVGTMAA NINPRPERIE NRQLSGANSN
601: GLTVELNDGV FGSSGNGSCP LPGHHYMWSN SHHPQSPGMM WPNSPSFMNG IGTAHPPPRL HGLPRAPSHM LNTMLSINNH HVGSAPTVNP SIWDRRHTYA
701: GESSEASGFH PGSLGSMRIS NNSLHPLEFA PHNIFPSVGG NCIDLSIPPK NVGLHSHHQR CLMFPGRSQL IPMMSSFDPP NERSRSRRND NSSNQVDNKK
801: QYELDIDRIL RGEDTRTTLM IKNIPNKYTS KMLLAAIDER HRGTYDFIYL PIDFKNKCNV GYAFINMTDP CQIIPFYQAF NGKKWEKFNS EKVASLAYAR
901: IQGKAALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQVP FPMGVNVRSR PGKTRTSSNE DNHQGSPPNL TTGEDYSNGD SSSGSTKDSD
101: EHDLGTRSNA NVHSASYFME GDKINMTGSQ YENGLFSSSL SELFNRKLRL SSNNGLYGHS VDTVAPHHEE EDLFESLEEI EAQTIGNLLP NEDDLLSGVA
201: DVLDYVVQPS NGDDLEDIDL FSSVGGMDLG DDGSSAGQRN SEYPGGMSNG QLGGSNGSAV GEHPYGEHPS RTLFVRNINS NVEDSELRIL FEQYGDIRAL
301: YTACKHRGFV MISYYDIRAA RNAMRALQNK PLRRRKLDIH YSIPKDNPPE KDVNQGTLVV FNLDPSVTND ELLQIFGVYG EIKEIRETPH RSHHKFVEFY
401: DIRAAEAALR ALNRSDIAGK RIKLEPSRPG GARRLMQQFP SELEEDESGL YLQQNNTPNN STTGFPALLT GPASLGAITS SSMENGTIMG VHSGIPFPIR
501: PFLENVSHHG ISSSVPNTLP SLLSVESVGS QSGLAESSRS QGQLKFDFRG TQSLHPHSLP EYNDGLANGA PCNPVGTMAA NINPRPERIE NRQLSGANSN
601: GLTVELNDGV FGSSGNGSCP LPGHHYMWSN SHHPQSPGMM WPNSPSFMNG IGTAHPPPRL HGLPRAPSHM LNTMLSINNH HVGSAPTVNP SIWDRRHTYA
701: GESSEASGFH PGSLGSMRIS NNSLHPLEFA PHNIFPSVGG NCIDLSIPPK NVGLHSHHQR CLMFPGRSQL IPMMSSFDPP NERSRSRRND NSSNQVDNKK
801: QYELDIDRIL RGEDTRTTLM IKNIPNKYTS KMLLAAIDER HRGTYDFIYL PIDFKNKCNV GYAFINMTDP CQIIPFYQAF NGKKWEKFNS EKVASLAYAR
901: IQGKAALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQVP FPMGVNVRSR PGKTRTSSNE DNHQGSPPNL TTGEDYSNGD SSSGSTKDSD
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.