Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0239g00110.t01 | Wine grape | plastid | 7.82 | 70.91 |
| VIT_01s0150g00090.t01 | Wine grape | nucleus | 63.83 | 64.34 |
| KRH59735 | Soybean | nucleus | 55.11 | 58.02 |
| KRH41056 | Soybean | nucleus | 55.21 | 57.76 |
| KRH63864 | Soybean | nucleus | 54.91 | 56.44 |
| KRH54096 | Soybean | nucleus | 54.01 | 55.74 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 42.28 | 49.76 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 42.18 | 47.62 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 27.05 | 45.53 |
| Os05t0102800-01 | Rice | nucleus | 42.48 | 44.4 |
| Zm00001d035763_P003 | Maize | plastid | 41.18 | 43.35 |
| TraesCS1B01G008000.1 | Wheat | nucleus | 40.38 | 43.06 |
| TraesCS1D01G002500.1 | Wheat | nucleus | 40.18 | 42.7 |
| OQU77194 | Sorghum | plastid | 34.67 | 42.3 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 39.88 | 41.07 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 4.61 | 32.86 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 7.82 | 25.74 |
| VIT_01s0137g00320.t01 | Wine grape | nucleus | 16.23 | 24.62 |
| VIT_14s0219g00270.t01 | Wine grape | plastid | 13.23 | 23.61 |
Protein Annotations
| EntrezGene:100261030 | wikigene:100261030 | Gene3D:3.30.70.330 | MapMan:35.1 | ProteinID:CBI15756 | ProteinID:CBI15756.3 |
| UniProt:D7SH76 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | EntrezGene:LOC100261030 | wikigene:LOC100261030 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 |
| InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 |
| PANTHER:PTHR44127:SF6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | TIGR:TC69482 |
| UniParc:UPI0001BE0FC5 | ArrayExpress:VIT_17s0000g00240 | EnsemblPlantsGene:VIT_17s0000g00240 | EnsemblPlants:VIT_17s0000g00240.t01 | unigene:Vvi.8692 | RefSeq:XP_002280892 |
| RefSeq:XP_002280892.2 | RefSeq:XP_010663800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr17:-:157879..167902
Molecular Weight (calculated)
110170.0 Da
IEP (calculated)
6.698
GRAVY (calculated)
-0.586
Length
998 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFEVMDPRG VSASSPLFDD ICFPAERQVG FWKPKIMSDH HAEGDGVARI PGSKSVTSSP LEKLLPVGSK SVDYSEGPES YLARDQKEKL QVNREEGTAN
101: LSRTPWRTVD HNSKTWSNLY VQPASSYVEV KKTSINGALY ESSLFSSSLS EIFNRKLRVS TSDVLSHQSA GTVAPHSEEE KLFKSLEEIE VQTLGNLLPD
201: EDELFSGVVD DMGYNAHANN GDDFEDFDLF SSGGGMELEG DDHLCISQRH SDFNGGIPNS QGGSNGSLAS EHPYGEHPSR TLFVRNINSN VEDSELRDLF
301: EQYGDIRTLY TACKHRGFVM ISYYDIRAAR NAMRALQNKP LRRRKLDIHY SIPKDNPSEK DINQGTLVVF NLDSSVSNDD LRQIFGIYGE IKEIRETPHK
401: RHHKFIEFFD VRAAEAALRA LNRSDIAGKR IKLEPSRPGG SRRCLMQLCS SELEQDESIL CQSPDDNLSS GCMAVSPGIK TSSCMDNVSI QDLHSAVRMP
501: IGSFVENATS HGSSSVPNTL PSPMRVVSII NEFGLGETSN TLDQMKFGNQ SFPNYHPHSL PEYHDNLANA IRYNSSSTIG DMTGHVGPRI TEGIDNRHIH
601: RVGSNGHPIE LNGGAFGSSG NGSCPVHGLH RAWGNSSSYQ HHSSSPMIWP NSPSFSNGVH AQRPTQVPGF PRPPPHMLNI VSPVHHHHVG SAPAVNPSLW
701: DRRHAYSGES PETSGFHLGS LGSVGFPGSS PLHPLEMASH IFPHVGGNCM DISANVGLRS PQQICHVFPG RNSMLSIPSS FDLPMERVRN LSHRRTEANS
801: NHTDKKQYEL DIDRILRGED CRTTLMIKNI PNKYTSKMLL AAIDEHHRGT YDFIYLPIDF KNKCNVGYAF VNMIDPLHIV PFHQAFNGKK WEKFNSEKVA
901: SLAYARIQGK TALIAHFQNS SLMNEDKRCR PILFHTDGPN AGDQEPFPMG SNIRSRPGKA RTSGGEESQH QGSPTTSANG EESSNGAVTL LGSAKDSD
101: LSRTPWRTVD HNSKTWSNLY VQPASSYVEV KKTSINGALY ESSLFSSSLS EIFNRKLRVS TSDVLSHQSA GTVAPHSEEE KLFKSLEEIE VQTLGNLLPD
201: EDELFSGVVD DMGYNAHANN GDDFEDFDLF SSGGGMELEG DDHLCISQRH SDFNGGIPNS QGGSNGSLAS EHPYGEHPSR TLFVRNINSN VEDSELRDLF
301: EQYGDIRTLY TACKHRGFVM ISYYDIRAAR NAMRALQNKP LRRRKLDIHY SIPKDNPSEK DINQGTLVVF NLDSSVSNDD LRQIFGIYGE IKEIRETPHK
401: RHHKFIEFFD VRAAEAALRA LNRSDIAGKR IKLEPSRPGG SRRCLMQLCS SELEQDESIL CQSPDDNLSS GCMAVSPGIK TSSCMDNVSI QDLHSAVRMP
501: IGSFVENATS HGSSSVPNTL PSPMRVVSII NEFGLGETSN TLDQMKFGNQ SFPNYHPHSL PEYHDNLANA IRYNSSSTIG DMTGHVGPRI TEGIDNRHIH
601: RVGSNGHPIE LNGGAFGSSG NGSCPVHGLH RAWGNSSSYQ HHSSSPMIWP NSPSFSNGVH AQRPTQVPGF PRPPPHMLNI VSPVHHHHVG SAPAVNPSLW
701: DRRHAYSGES PETSGFHLGS LGSVGFPGSS PLHPLEMASH IFPHVGGNCM DISANVGLRS PQQICHVFPG RNSMLSIPSS FDLPMERVRN LSHRRTEANS
801: NHTDKKQYEL DIDRILRGED CRTTLMIKNI PNKYTSKMLL AAIDEHHRGT YDFIYLPIDF KNKCNVGYAF VNMIDPLHIV PFHQAFNGKK WEKFNSEKVA
901: SLAYARIQGK TALIAHFQNS SLMNEDKRCR PILFHTDGPN AGDQEPFPMG SNIRSRPGKA RTSGGEESQH QGSPTTSANG EESSNGAVTL LGSAKDSD
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.