Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g056340.2.1 | Tomato | nucleus | 88.35 | 93.18 |
| PGSC0003DMT400054712 | Potato | nucleus | 77.53 | 77.62 |
| VIT_12s0142g00100.t01 | Wine grape | nucleus | 68.59 | 68.75 |
| KRH46056 | Soybean | nucleus, plastid | 64.12 | 63.67 |
| KRG98918 | Soybean | plastid | 63.88 | 63.36 |
| PGSC0003DMT400007982 | Potato | nucleus | 55.88 | 55.82 |
| Bra000279.1-P | Field mustard | nucleus | 43.53 | 47.01 |
| Bra004728.1-P | Field mustard | nucleus | 40.12 | 46.27 |
| AT2G42890.1 | Thale cress | nucleus | 44.82 | 45.2 |
| PGSC0003DMT400005752 | Potato | nucleus | 41.06 | 35.76 |
| PGSC0003DMT400008115 | Potato | cytosol | 5.41 | 31.94 |
| CDY71762 | Canola | nucleus | 7.76 | 27.5 |
| PGSC0003DMT400027957 | Potato | nucleus | 13.06 | 22.93 |
| PGSC0003DMT400085334 | Potato | peroxisome | 6.94 | 22.01 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 6.35 | 21.77 |
| PGSC0003DMT400060283 | Potato | cytosol | 7.53 | 21.26 |
| PGSC0003DMT400090567 | Potato | plastid | 7.41 | 21.07 |
| PGSC0003DMT400091031 | Potato | cytosol | 6.12 | 20.97 |
| Zm00001d008437_P001 | Maize | mitochondrion, nucleus, plastid | 5.88 | 14.93 |
Protein Annotations
| EntrezGene:102600486 | Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M1BGD9 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 |
| InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | EnsemblPlantsGene:PGSC0003DMG400017300 | PGSC:PGSC0003DMG400017300 |
| EnsemblPlants:PGSC0003DMT400044564 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000295D676 | SEG:seg | : | : |
Description
AML1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017300]
Coordinates
chr7:+:51123715..51128155
Molecular Weight (calculated)
93923.4 Da
IEP (calculated)
6.539
GRAVY (calculated)
-0.537
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSLKKLIS DDSEGKVIPI AYRNIPSAKT SGTERNAWKI HLGTAAHHAS TDASLFSSSL PVLPHAKLNF AESENYSHST DDSSPSLNRL HLEDEIKDPL
101: EVEPSPDGCF LPGDEDELLA GLMDDFDLSG LPTQLEDLED DFFGSGGGLE LESDTLDNSL NGFAKLSMSD GILGSIVGHH VFPNSAGIVT GEHPYGEHPS
201: RTLFVRNINS NVEDSELRSL FEQYGDIRTL YTSCKHRGFV MISYYDIRAA RTAMRMLQHK PLRRRKLDIH FSIPKENPSE KDINQGTLVI FNLDPSVSNE
301: DLLQIFGDYG EVKEIRETPH KRHHKFIEFY DVRAAEAALK ALNRSDIAGK RIKLEPSRPG GARRSLMQQL SQDYEHEEVR TFRHSVGSPI ASPPGSWSNF
401: GSPVEHSSLL GYNQSPDMTN LSPVNGNHMP GLAAILPGHF SSPKIAPIGK DPGRFGSLNH AITSPKSVQG MGYQQSYSVP EHKPHLNFGS MSLGEPKSSG
501: IGTLSGPQFL WGSPPIQSER TDSSVWSNSS LAHPFTSNEQ GQGYPYSRRQ GLFLGSHHVG SAPSGIPLDR RLGFFSESPE TSYMNQVAYG STGSSHSHGM
601: SIGRLGAMNM AGSLARNFTE GGSPISRMIP LPRNGPIFFG NGSYGGIGMT NNEGITEQVR SRRVESGNEI DNKKQYLLDL KKITSGEDAR TTLMIKNIPN
701: KYTSRMLLTA IDETHKNTYD FLYLPIDFKN KCNVGYAFIN MVSPSHIISF YEVFNGKKWE KFNSEKVASL AYARIQGKVA LVAHFQNSSL MNEDKRCRPI
801: LFQSEGQERA DQELLPTNNL NICVRLPDGS YSGDSLDSPN SDLDEKLYMH
101: EVEPSPDGCF LPGDEDELLA GLMDDFDLSG LPTQLEDLED DFFGSGGGLE LESDTLDNSL NGFAKLSMSD GILGSIVGHH VFPNSAGIVT GEHPYGEHPS
201: RTLFVRNINS NVEDSELRSL FEQYGDIRTL YTSCKHRGFV MISYYDIRAA RTAMRMLQHK PLRRRKLDIH FSIPKENPSE KDINQGTLVI FNLDPSVSNE
301: DLLQIFGDYG EVKEIRETPH KRHHKFIEFY DVRAAEAALK ALNRSDIAGK RIKLEPSRPG GARRSLMQQL SQDYEHEEVR TFRHSVGSPI ASPPGSWSNF
401: GSPVEHSSLL GYNQSPDMTN LSPVNGNHMP GLAAILPGHF SSPKIAPIGK DPGRFGSLNH AITSPKSVQG MGYQQSYSVP EHKPHLNFGS MSLGEPKSSG
501: IGTLSGPQFL WGSPPIQSER TDSSVWSNSS LAHPFTSNEQ GQGYPYSRRQ GLFLGSHHVG SAPSGIPLDR RLGFFSESPE TSYMNQVAYG STGSSHSHGM
601: SIGRLGAMNM AGSLARNFTE GGSPISRMIP LPRNGPIFFG NGSYGGIGMT NNEGITEQVR SRRVESGNEI DNKKQYLLDL KKITSGEDAR TTLMIKNIPN
701: KYTSRMLLTA IDETHKNTYD FLYLPIDFKN KCNVGYAFIN MVSPSHIISF YEVFNGKKWE KFNSEKVASL AYARIQGKVA LVAHFQNSSL MNEDKRCRPI
801: LFQSEGQERA DQELLPTNNL NICVRLPDGS YSGDSLDSPN SDLDEKLYMH
001: MELEPNKSLS ADMPSLLSRS SEAFNGGTGY RSSSDLSMFS SSLPTLFHEK LNMTDSDSWL SFDESSPNLN KLVIGNSEKD SLEDVEPDAL EILLPEDENE
101: LLPGLIDELN FTGLPDELDD LEECDVFCTG GGMELDVESQ DNHAVDASGM QISDRGAANA FVPRKRPNTA GRVSVEHPNG EHPSRTLFVR NINSSVEDSE
201: LSALFEPFGE IRSLYTACKS RGFVMISYYD IRAAHAAMRA LQNTLLRKRT LDIHFSIPKE NPSEKDMNQG TLVIFNVDTT VSNDELLQLF GAYGEIREIR
301: ETPNRRFHRF IEYYDVRDAE TALKALNRSE IGGKCIKLEL SRPGGARRLS VPSQSQDLER TEVTNFYNQV GSHVANSPPG NWPIGSPVKG SPSHAFTRPH
401: GLGMVRPVNS DNMPGLASIL PAHPSSFHGF SPVSNDQGLL NHSNQTILNK GLMHNISYGQ PHSLPEHITG GISNSMRFIA PHSSGFGTSS DHRYRWGSPP
501: QHMNYPGYTG VSSSSSSTER PFTVRHGFPF AERQASLLGK YQHHVGSAPS SIHFNTQMNC YTGSPEIPLG FSDMGINRNY NSAHGKANLG VSLPGNSSEQ
601: DFTGFGMSSM PTVPFGGSRG LQSVRPEPFA EQGRIHNHES HNQNQFIDGG RYHIDLDRIA SGDEIRTTLI IKNIPNKYTY KMLVAEIDEK HKGDYDFLCL
701: PTDFKNKCNM GHAFINMVSP LHIVPFQQTF NGKIWEKFNS GKVASLAYAE IQGKSALASY MQTPSSMKEQ KQLFPEVSYH DDGQDANDHE QLFSSIWNIT
801: APDSDWSYTM DLIENPRENG NSKNAAEESS
101: LLPGLIDELN FTGLPDELDD LEECDVFCTG GGMELDVESQ DNHAVDASGM QISDRGAANA FVPRKRPNTA GRVSVEHPNG EHPSRTLFVR NINSSVEDSE
201: LSALFEPFGE IRSLYTACKS RGFVMISYYD IRAAHAAMRA LQNTLLRKRT LDIHFSIPKE NPSEKDMNQG TLVIFNVDTT VSNDELLQLF GAYGEIREIR
301: ETPNRRFHRF IEYYDVRDAE TALKALNRSE IGGKCIKLEL SRPGGARRLS VPSQSQDLER TEVTNFYNQV GSHVANSPPG NWPIGSPVKG SPSHAFTRPH
401: GLGMVRPVNS DNMPGLASIL PAHPSSFHGF SPVSNDQGLL NHSNQTILNK GLMHNISYGQ PHSLPEHITG GISNSMRFIA PHSSGFGTSS DHRYRWGSPP
501: QHMNYPGYTG VSSSSSSTER PFTVRHGFPF AERQASLLGK YQHHVGSAPS SIHFNTQMNC YTGSPEIPLG FSDMGINRNY NSAHGKANLG VSLPGNSSEQ
601: DFTGFGMSSM PTVPFGGSRG LQSVRPEPFA EQGRIHNHES HNQNQFIDGG RYHIDLDRIA SGDEIRTTLI IKNIPNKYTY KMLVAEIDEK HKGDYDFLCL
701: PTDFKNKCNM GHAFINMVSP LHIVPFQQTF NGKIWEKFNS GKVASLAYAE IQGKSALASY MQTPSSMKEQ KQLFPEVSYH DDGQDANDHE QLFSSIWNIT
801: APDSDWSYTM DLIENPRENG NSKNAAEESS
Arabidopsis Description
ML2ML2 [Source:UniProtKB/TrEMBL;Acc:A0A178VQK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.