Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035509.1-P | Field mustard | cytosol, plastid | 98.74 | 98.74 |
| CDY62093 | Canola | nucleus, plastid | 94.14 | 90.0 |
| AT1G37140.1 | Thale cress | plastid | 58.58 | 60.09 |
| GSMUA_Achr11P... | Banana | cytosol | 25.52 | 38.12 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 26.78 | 37.43 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 25.94 | 35.23 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 32.64 | 28.68 |
| KRH18810 | Soybean | cytosol | 31.8 | 28.25 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 32.22 | 26.01 |
| Solyc05g056360.1.1 | Tomato | cytosol | 32.22 | 23.33 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 24.27 | 23.11 |
| CDY14020 | Canola | plastid | 25.94 | 22.14 |
| PGSC0003DMT400060283 | Potato | cytosol | 26.78 | 21.26 |
| Zm00001d006207_P001 | Maize | plastid | 29.29 | 20.96 |
| CDY40768 | Canola | nucleus | 25.94 | 20.53 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 26.36 | 20.0 |
| Os09t0531200-01 | Rice | cytosol | 26.36 | 19.5 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 24.69 | 19.47 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 25.94 | 19.44 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.36 | 18.92 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 26.78 | 18.6 |
| Zm00001d053860_P001 | Maize | plastid | 26.78 | 18.34 |
| OQU89813 | Sorghum | nucleus, plastid | 28.03 | 18.21 |
| EES04542 | Sorghum | plastid | 26.36 | 18.16 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 28.45 | 17.48 |
| TraesCS6B01G159300.2 | Wheat | plastid | 28.87 | 16.83 |
| TraesCS5B01G319500.1 | Wheat | plastid | 26.78 | 16.29 |
| CDY01848 | Canola | plastid | 30.54 | 14.54 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 15.06 | 14.4 |
| CDY56219 | Canola | plastid | 30.96 | 14.07 |
| CDX83589 | Canola | nucleus | 31.38 | 12.91 |
| CDY13612 | Canola | nucleus | 32.22 | 12.66 |
| CDX99727 | Canola | nucleus | 31.38 | 12.44 |
| CDY40990 | Canola | nucleus | 31.38 | 12.25 |
| CDY30686 | Canola | nucleus | 18.83 | 8.49 |
| CDX78826 | Canola | nucleus | 19.67 | 7.07 |
| CDY61671 | Canola | nucleus | 19.25 | 6.93 |
| CDY15631 | Canola | nucleus | 18.83 | 6.11 |
| CDX94663 | Canola | nucleus | 18.83 | 6.11 |
| CDY48336 | Canola | nucleus | 19.25 | 5.95 |
| CDX99820 | Canola | nucleus | 19.25 | 5.81 |
| CDY30687 | Canola | nucleus | 20.08 | 5.61 |
| CDX98985 | Canola | nucleus | 19.67 | 5.31 |
| CDX70025 | Canola | nucleus | 19.25 | 5.18 |
| CDX83512 | Canola | nucleus | 16.74 | 5.08 |
| CDY42812 | Canola | nucleus | 16.32 | 4.92 |
| CDX79841 | Canola | nucleus | 15.9 | 4.9 |
| CDY42813 | Canola | nucleus | 16.74 | 4.9 |
| CDY60197 | Canola | endoplasmic reticulum, plasma membrane | 15.48 | 4.58 |
| CDY00238 | Canola | nucleus | 16.32 | 4.27 |
| CDX86947 | Canola | nucleus | 15.48 | 4.07 |
| CDY72437 | Canola | nucleus | 1.26 | 1.2 |
| CDY71762 | Canola | nucleus | 0.84 | 0.83 |
Protein Annotations
| EnsemblPlants:CDY44647 | EnsemblPlantsGene:GSBRNA2T00080610001 | Gene3D:3.30.70.330 | GO:A0A078I3M2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:CDY44647 | ProteinID:CDY44647.1 | SEG:seg | SUPFAM:SSF54928 |
| UniParc:UPI0004EE7AEE | UniProt:A0A078I3M2 | MapMan:35.1 | : | : | : |
Description
BnaA08g06930DBnaA08g06930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3M2]
Coordinates
chrLK032598:+:2131..3464
Molecular Weight (calculated)
27598.3 Da
IEP (calculated)
10.458
GRAVY (calculated)
-0.631
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPLNPKAP EFYPRNRAQE LSQKPKFLSF TTFSVKPGKL SRPKCLPPRL LKQKAWVQKN RNVLPRKPLP PPKEAELKSL FGDQTSVMIR NIPNMFGRKD
101: LLRILNNHCR RENKVQQQIP SSYDFLYLPM DFVKHANLGY AFVNFTSSVA AERFRREYDN FSWVGFGYKK ICEISEAKYQ GKEEYTQHFK DSRFPCHTDD
201: YLPVILSPPS NGFTCYSLAT LGYRVSTRGG GTGRRIHVA
101: LLRILNNHCR RENKVQQQIP SSYDFLYLPM DFVKHANLGY AFVNFTSSVA AERFRREYDN FSWVGFGYKK ICEISEAKYQ GKEEYTQHFK DSRFPCHTDD
201: YLPVILSPPS NGFTCYSLAT LGYRVSTRGG GTGRRIHVA
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.