Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- extracellular 1
- plasma membrane 1
- golgi 1
- nucleus 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 76.95 | 76.1 |
| GSMUA_Achr11P... | Banana | cytosol | 22.68 | 38.12 |
| AT1G37140.1 | Thale cress | plastid | 30.48 | 35.19 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 21.19 | 33.33 |
| Bra035509.1-P | Field mustard | cytosol, plastid | 28.62 | 32.22 |
| CDY44647 | Canola | nucleus, plastid | 28.25 | 31.8 |
| CDY62093 | Canola | nucleus, plastid | 28.62 | 30.8 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 19.7 | 30.11 |
| KRH31364 | Soybean | cytosol, nucleus | 18.22 | 28.32 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 30.48 | 27.7 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 23.79 | 25.5 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 26.39 | 22.54 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 26.02 | 21.94 |
| Solyc05g056360.1.1 | Tomato | cytosol | 26.77 | 21.82 |
| Os09t0531200-01 | Rice | cytosol | 25.65 | 21.36 |
| Zm00001d053860_P001 | Maize | plastid | 27.51 | 21.2 |
| KRH29371 | Soybean | nucleus | 29.0 | 21.2 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 23.79 | 21.12 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.02 | 21.02 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 26.39 | 20.64 |
| KRH24390 | Soybean | nucleus | 26.39 | 20.11 |
| PGSC0003DMT400060283 | Potato | cytosol | 22.3 | 19.93 |
| Zm00001d006207_P001 | Maize | plastid | 24.54 | 19.76 |
| EES04542 | Sorghum | plastid | 25.28 | 19.6 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 26.02 | 17.99 |
| TraesCS5B01G319500.1 | Wheat | plastid | 25.65 | 17.56 |
| OQU89813 | Sorghum | nucleus, plastid | 23.42 | 17.12 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 15.24 | 16.4 |
| TraesCS6B01G159300.2 | Wheat | plastid | 24.91 | 16.34 |
| KRG97510 | Soybean | nucleus | 26.02 | 12.99 |
| KRH31365 | Soybean | nucleus | 11.15 | 9.23 |
| KRH45198 | Soybean | nucleus | 18.96 | 6.91 |
| KRH46056 | Soybean | nucleus, plastid | 20.45 | 6.43 |
| KRG98918 | Soybean | plastid | 20.07 | 6.3 |
| KRH37781 | Soybean | nucleus | 20.07 | 6.26 |
| KRH59735 | Soybean | nucleus | 21.56 | 6.12 |
| KRH41056 | Soybean | nucleus | 21.56 | 6.08 |
| KRH12823 | Soybean | nucleus | 19.33 | 6.03 |
| KRH54096 | Soybean | nucleus | 21.56 | 6.0 |
| KRH63864 | Soybean | nucleus | 21.56 | 5.97 |
Protein Annotations
| EMBL:ACUP02008134 | EnsemblPlants:KRH18810 | EnsemblPlantsGene:GLYMA_13G083500 | EntrezGene:102668967 | Gene3D:3.30.70.330 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR012677 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf |
| InterPro:RBD_domain_sf | PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:KRH18810 | ProteinID:KRH18810.1 | SUPFAM:SSF54928 |
| UniParc:UPI00023D0474 | UniProt:I1LW38 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:19425108..19429731
Molecular Weight (calculated)
30923.1 Da
IEP (calculated)
10.245
GRAVY (calculated)
-0.539
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSQYPLNPN AQSYYSTPNN QVFYDPRFIH HYVPPSNLGV YPPSPFPFPC DQNVKTVQVW ARVRGRKLLA ENNARAKPLG NRAVPFPNTV QEAKTSSITT
101: VMIRNIPNQF KFEDLQLILD EHCFKQNKSA EDPKAWSKFD FVYLPMDYGK HAIEKKKSNL GYAFVNFTTP AAAFKFYSEF QGFEWDVAKN KKICEINVAQ
201: YQGKDTLKRI FQGKVFKCES RDFLPVLYSG GGRDGLNRRI KGTYVGKHVL GLPRKKNPRN LFLLINPNV
101: VMIRNIPNQF KFEDLQLILD EHCFKQNKSA EDPKAWSKFD FVYLPMDYGK HAIEKKKSNL GYAFVNFTTP AAAFKFYSEF QGFEWDVAKN KKICEINVAQ
201: YQGKDTLKRI FQGKVFKCES RDFLPVLYSG GGRDGLNRRI KGTYVGKHVL GLPRKKNPRN LFLLINPNV
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.