Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44647 | Canola | nucleus, plastid | 90.0 | 94.14 |
| AT1G37140.1 | Thale cress | plastid | 53.6 | 57.51 |
| GSMUA_Achr11P... | Banana | cytosol | 24.0 | 37.5 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 25.6 | 37.43 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 25.2 | 35.8 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 31.2 | 28.68 |
| KRH18810 | Soybean | cytosol | 30.8 | 28.62 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 31.6 | 26.69 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 24.0 | 23.9 |
| Solyc05g056360.1.1 | Tomato | cytosol | 31.2 | 23.64 |
| CDY14020 | Canola | plastid | 24.8 | 22.14 |
| Zm00001d006207_P001 | Maize | plastid | 29.2 | 21.86 |
| PGSC0003DMT400060283 | Potato | cytosol | 26.0 | 21.59 |
| CDY40768 | Canola | nucleus | 24.8 | 20.53 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 25.6 | 20.32 |
| VIT_18s0001g03840.t01 | Wine grape | mitochondrion | 24.4 | 20.13 |
| Os09t0531200-01 | Rice | cytosol | 25.6 | 19.81 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 25.2 | 19.75 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 26.0 | 19.52 |
| OQU89813 | Sorghum | nucleus, plastid | 28.0 | 19.02 |
| Zm00001d053860_P001 | Maize | plastid | 26.4 | 18.91 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 26.0 | 18.9 |
| EES04542 | Sorghum | plastid | 26.0 | 18.73 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 28.4 | 18.25 |
| TraesCS6B01G159300.2 | Wheat | plastid | 28.4 | 17.32 |
| TraesCS5B01G319500.1 | Wheat | plastid | 26.4 | 16.79 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 14.8 | 14.8 |
| CDY01848 | Canola | plastid | 29.2 | 14.54 |
| CDY56219 | Canola | plastid | 29.6 | 14.07 |
| CDX83589 | Canola | nucleus | 30.4 | 13.08 |
| CDY13612 | Canola | nucleus | 31.2 | 12.83 |
| CDX99727 | Canola | nucleus | 30.4 | 12.6 |
| CDY40990 | Canola | nucleus | 30.4 | 12.42 |
| CDY30686 | Canola | nucleus | 19.2 | 9.06 |
| CDX78826 | Canola | nucleus | 19.2 | 7.22 |
| CDY61671 | Canola | nucleus | 18.8 | 7.08 |
| CDY15631 | Canola | nucleus | 18.4 | 6.25 |
| CDX94663 | Canola | nucleus | 18.4 | 6.24 |
| CDY48336 | Canola | nucleus | 19.2 | 6.21 |
| CDX99820 | Canola | nucleus | 19.2 | 6.06 |
| CDY30687 | Canola | nucleus | 20.4 | 5.96 |
| CDX98985 | Canola | nucleus | 19.2 | 5.42 |
| CDX70025 | Canola | nucleus | 19.2 | 5.41 |
| CDX83512 | Canola | nucleus | 16.4 | 5.21 |
| CDY42812 | Canola | nucleus | 16.4 | 5.17 |
| CDX79841 | Canola | nucleus | 16.0 | 5.16 |
| CDY42813 | Canola | nucleus | 16.8 | 5.14 |
| CDY60197 | Canola | endoplasmic reticulum, plasma membrane | 16.0 | 4.95 |
| CDY00238 | Canola | nucleus | 16.8 | 4.6 |
| CDX86947 | Canola | nucleus | 16.0 | 4.4 |
| CDY72437 | Canola | nucleus | 1.2 | 1.2 |
| CDY71762 | Canola | nucleus | 0.8 | 0.83 |
Protein Annotations
| EnsemblPlants:CDY62093 | EnsemblPlantsGene:GSBRNA2T00035942001 | GO:A0A078JCV3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:RBD_domain_sf | PANTHER:PTHR45087 | PFAM:PF04059 | ProteinID:CDY62093 |
| ProteinID:CDY62093.1 | SEG:seg | SUPFAM:SSF54928 | UniParc:UPI0004EE953B | UniProt:A0A078JCV3 | MapMan:35.1 |
Description
BnaCnng39130DBnaCnng39130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCV3]
Coordinates
chrLK034096:+:23063..24424
Molecular Weight (calculated)
28858.8 Da
IEP (calculated)
10.297
GRAVY (calculated)
-0.642
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPLNPKAP EFYPKNRAQE LSQKPKFLSF TTFSVKPGKL SRPKCLPPRL LKQKVWVPNN RNFLPRKPLP PPKEAELKSP HSPQEDTLKS LSGDKTSVMI
101: RNIPNMFGRK DLLRILNIHC RRENKVQQQI PSSYDFLYLP MDFVKHANLG YAFVNFTSSV AAERFRREYD NFLWVGFEYK KICEISEAKY QGKEEYTQHF
201: KDSRFPCHTD HYLPVILSPP SDGFTCYSVA TLGYRVSTRG GGTGRRIQVA
101: RNIPNMFGRK DLLRILNIHC RRENKVQQQI PSSYDFLYLP MDFVKHANLG YAFVNFTSSV AAERFRREYD NFLWVGFEYK KICEISEAKY QGKEEYTQHF
201: KDSRFPCHTD HYLPVILSPP SDGFTCYSVA TLGYRVSTRG GGTGRRIQVA
001: METKKPTKSL NPYAPAFTPP SRSPPLFNFN KPFPCYNKPF KAITGAHVKP EKNPFVRYGF CHRRCLPPRL LKKPLPENKL AGRTSVMVKN IPNCLGRMDL
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
101: LRILDNHCRK HNEKSSYDFL YLPMDFGKRA NLGYAFVNFT SSLAAERFRR EFENFSWDNI GFRKKICEIT VAKYQGKEEL TRHFRNSRFT CHTDDYLPVV
201: LSPPSNGFTA YTLTKLGYRV GALGGGSRNA SLR
Arabidopsis Description
MCT1MEI2 C-terminal RRM only like 1 [Source:UniProtKB/TrEMBL;Acc:Q4PT05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.