Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29371 | Soybean | nucleus | 81.3 | 77.99 |
| VIT_03s0038g00390.t01 | Wine grape | cytosol | 18.7 | 47.14 |
| PGSC0003DMT400008115 | Potato | cytosol | 15.3 | 37.5 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 18.13 | 37.43 |
| GSMUA_Achr11P... | Banana | cytosol | 16.71 | 36.88 |
| Solyc01g110240.1.1 | Tomato | cytosol, peroxisome, plastid | 19.55 | 34.5 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 17.0 | 34.09 |
| KRH31364 | Soybean | cytosol, nucleus | 16.43 | 33.53 |
| Solyc01g110260.1.1 | Tomato | cytosol | 17.56 | 33.33 |
| CDY14020 | Canola | plastid | 26.06 | 32.86 |
| Bra028677.1-P | Field mustard | nucleus, plastid | 25.5 | 32.14 |
| CDY40768 | Canola | nucleus | 25.21 | 29.47 |
| Solyc01g110200.1.1 | Tomato | plastid | 22.38 | 28.52 |
| PGSC0003DMT400085334 | Potato | peroxisome | 21.53 | 28.36 |
| PGSC0003DMT400091031 | Potato | cytosol | 19.55 | 27.82 |
| PGSC0003DMT400086312 | Potato | cytosol, nucleus, plasma membrane, plastid | 19.55 | 27.82 |
| TraesCS7B01G269200.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 24.65 | 27.62 |
| TraesCS7D01G364300.1 | Wheat | nucleus, plasma membrane, plastid | 24.65 | 27.27 |
| Solyc01g110230.1.1 | Tomato | cytosol | 19.55 | 27.17 |
| KRH16604 | Soybean | cytosol, nucleus, peroxisome | 20.68 | 26.84 |
| PGSC0003DMT400090567 | Potato | plastid | 22.38 | 26.42 |
| KRH18810 | Soybean | cytosol | 20.11 | 26.39 |
| AT5G07930.3 | Thale cress | nucleus | 21.53 | 25.85 |
| Os09t0531200-01 | Rice | cytosol | 23.51 | 25.7 |
| TraesCS5D01G325300.1 | Wheat | mitochondrion, plasma membrane | 18.13 | 25.5 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 20.96 | 25.0 |
| Solyc01g110210.1.1 | Tomato | nucleus | 18.13 | 24.9 |
| Solyc01g110220.1.1 | Tomato | cytosol | 16.43 | 23.77 |
| TraesCS5D01G325200.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 21.25 | 22.52 |
| Zm00001d006207_P001 | Maize | plastid | 20.68 | 21.86 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 20.96 | 21.51 |
| EES04542 | Sorghum | plastid | 20.11 | 20.46 |
| Zm00001d053860_P001 | Maize | plastid | 20.11 | 20.34 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 22.38 | 20.31 |
| OQU89813 | Sorghum | nucleus, plastid | 20.68 | 19.84 |
| TraesCS5B01G319500.1 | Wheat | plastid | 21.25 | 19.08 |
| TraesCS6B01G159300.2 | Wheat | plastid | 21.81 | 18.78 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 12.75 | 18.0 |
| KRG97510 | Soybean | nucleus | 25.21 | 16.51 |
| KRH31365 | Soybean | nucleus | 11.05 | 12.0 |
| KRH46056 | Soybean | nucleus, plastid | 18.98 | 7.83 |
| KRH37781 | Soybean | nucleus | 18.98 | 7.77 |
| KRG98918 | Soybean | plastid | 18.41 | 7.58 |
| KRH12823 | Soybean | nucleus | 18.41 | 7.54 |
| KRH45198 | Soybean | nucleus | 15.01 | 7.18 |
| KRH59735 | Soybean | nucleus | 18.13 | 6.75 |
| KRH41056 | Soybean | nucleus | 18.13 | 6.71 |
| KRH63864 | Soybean | nucleus | 17.56 | 6.39 |
| KRH54096 | Soybean | nucleus | 17.28 | 6.31 |
Protein Annotations
| EntrezGene:102668786 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02007175 | EnsemblPlantsGene:GLYMA_12G038400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7LSW9 |
| EnsemblPlants:KRH24390 | ProteinID:KRH24390 | ProteinID:KRH24390.1 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 |
| UniParc:UPI000296EDF4 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:2767699..2769868
Molecular Weight (calculated)
40607.3 Da
IEP (calculated)
10.029
GRAVY (calculated)
-0.752
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLLNPEAP EYLPSHNHKL QQQQQQLQPL ACPTSLFPHH GHFSVFSLFP SRHPNPFFYY PTLTLPPPPS IPLALEAHQQ TRFHNIKNDS DSNPVEAHAV
101: HQKKDQVVLA EPKTGGGSIG LVKKQALNAY INGRRSAESW RQKSYPPRKK VEENGQRKNV DFLRNRKVFR QPDDEQPFRG FPKRNRFNLS LPVRDGETTV
201: MIRNIPSKYT RELLVDFLED HCLKVNRGDK EAAFKGKDEE PIGLAFDFVY LPIDFKTRMN KGYAFVNFTQ PQAARKFLKT ASNLKWELFQ SNKIRDVVSA
301: RLQGKEQLEE HFATMNFPYE SEDVLPVSFS PPCDGVNKGE QRTIGNLTKR HHV
101: HQKKDQVVLA EPKTGGGSIG LVKKQALNAY INGRRSAESW RQKSYPPRKK VEENGQRKNV DFLRNRKVFR QPDDEQPFRG FPKRNRFNLS LPVRDGETTV
201: MIRNIPSKYT RELLVDFLED HCLKVNRGDK EAAFKGKDEE PIGLAFDFVY LPIDFKTRMN KGYAFVNFTQ PQAARKFLKT ASNLKWELFQ SNKIRDVVSA
301: RLQGKEQLEE HFATMNFPYE SEDVLPVSFS PPCDGVNKGE QRTIGNLTKR HHV
001: MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS IWVYYPLWYI NPNPNVYEST QELPQRYSPN PSQEMTLPPT
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
101: SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN
201: AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR SGGKDTVQTT MVGKCNEPVC SV
Arabidopsis Description
MCT2MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.