Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G286200.6 | Wheat | nucleus | 98.59 | 98.48 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 98.05 | 98.05 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 91.87 | 90.21 |
| Zm00001d025278_P025 | Maize | nucleus | 65.01 | 60.24 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 63.49 | 58.54 |
| OQU81438 | Sorghum | plastid | 65.11 | 56.81 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 52.55 | 52.38 |
| GSMUA_Achr10P... | Banana | nucleus | 52.76 | 50.94 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 53.2 | 50.88 |
| GSMUA_Achr10P... | Banana | nucleus | 54.06 | 49.36 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 39.0 | 37.15 |
| TraesCS7A01G003100.1 | Wheat | plastid | 34.56 | 36.75 |
| TraesCS4A01G495500.1 | Wheat | plastid | 34.67 | 36.53 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 5.09 | 26.7 |
| TraesCS3A01G413400.1 | Wheat | nucleus | 15.71 | 21.32 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 3.36 | 12.4 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS2A01G287900 | EnsemblPlants:TraesCS2A01G287900.4 | TIGR:cd12524 | TIGR:cd12531 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:492513412..492519601
Molecular Weight (calculated)
101948.0 Da
IEP (calculated)
7.443
GRAVY (calculated)
-0.667
Length
923 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPYKLMDQK TPFGEHKLLG HQRHVNLPPT PWRADQDPLQ QHDSFSKPLA LFPNARKGHL NMTQYENGLF SSSLPDIFDN KLRLTPKNGL VGQPAEKELN
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNMDDIDD DIFSTGGGME LEADENNKLL KLNGGANTGQ TGFNGLLYGE NPSRTLSIRN
201: INTNVEDTEL KLLFEQYGDI RTLYTAYKHH GLVMISYYDI RSAERAMKAL QSKPFRQWKL EIHYSIPTEN PLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHG TSQNGHHKYV EFFDTRAAEA ALYALNMRDI AGKKIRLERC CLGDGKRLTR HRPPELEHEE YGACKLGNAN SLPSTYYGSV NMASMTSAGP
401: EHGISRVLRP RVQPPIHQFR EGAFLDVPSN TMQSISSPVR IATAVTHNNR STVGENGHSL GKMGGQINGH LNYGFHGVGA FNPHSLPDFR NGQSNGISCN
501: LGTISPIGVK SNSRTAEGME SRHLYKVGSA NLGGHSSGHT EAPGFSRTGS CPLHGHQVAW NNSNNSHHHT SSPMLWTNSG SFINNIPSRP PMQAHGISRT
601: SRMLENVLPV NHHVGSAPAV NPSILDRRTG YVGELMEAPS FHPGSAGSMG FSGSPHLHQL ELTSMFPQSG GNQAMSPAHI GARSPQQRGH MFNGRGHIGP
701: PPSSFDSPGE RARSRRNESC ANQSDNKRQY ELDIERIVCG EDSRTTLMIK NIPNKYTSKM LLTAIDENHK GTYDFIYLPI DFKNKCNVGY AFINMISPEH
801: IVPFYKIFHG KRWEKFNSEK VASLAYARIQ GKSSLIAHFQ NSSLMNEDKR CRPILFHSDG PNAGDQEPFP MGTHVRSRPG RSRVLSCEES HRDTLSSSAN
901: NWTPSNGGGH ASGYSKEADP TTA
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNMDDIDD DIFSTGGGME LEADENNKLL KLNGGANTGQ TGFNGLLYGE NPSRTLSIRN
201: INTNVEDTEL KLLFEQYGDI RTLYTAYKHH GLVMISYYDI RSAERAMKAL QSKPFRQWKL EIHYSIPTEN PLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHG TSQNGHHKYV EFFDTRAAEA ALYALNMRDI AGKKIRLERC CLGDGKRLTR HRPPELEHEE YGACKLGNAN SLPSTYYGSV NMASMTSAGP
401: EHGISRVLRP RVQPPIHQFR EGAFLDVPSN TMQSISSPVR IATAVTHNNR STVGENGHSL GKMGGQINGH LNYGFHGVGA FNPHSLPDFR NGQSNGISCN
501: LGTISPIGVK SNSRTAEGME SRHLYKVGSA NLGGHSSGHT EAPGFSRTGS CPLHGHQVAW NNSNNSHHHT SSPMLWTNSG SFINNIPSRP PMQAHGISRT
601: SRMLENVLPV NHHVGSAPAV NPSILDRRTG YVGELMEAPS FHPGSAGSMG FSGSPHLHQL ELTSMFPQSG GNQAMSPAHI GARSPQQRGH MFNGRGHIGP
701: PPSSFDSPGE RARSRRNESC ANQSDNKRQY ELDIERIVCG EDSRTTLMIK NIPNKYTSKM LLTAIDENHK GTYDFIYLPI DFKNKCNVGY AFINMISPEH
801: IVPFYKIFHG KRWEKFNSEK VASLAYARIQ GKSSLIAHFQ NSSLMNEDKR CRPILFHSDG PNAGDQEPFP MGTHVRSRPG RSRVLSCEES HRDTLSSSAN
901: NWTPSNGGGH ASGYSKEADP TTA
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.